# Generated by roxygen2: do not edit by hand

export(TaxaNorm_Model_Parameters)
export(TaxaNorm_Model_QC)
export(TaxaNorm_NMDS)
export(TaxaNorm_Normalization)
export(TaxaNorm_QC_Input)
export(TaxaNorm_Results)
export(TaxaNorm_Run_Diagnose)
exportClasses(TaxaNorm_Model_Parameters)
exportClasses(TaxaNorm_Results)
exportMethods("coefficients<-")
exportMethods("converge<-")
exportMethods("ecdf<-")
exportMethods("final_df<-")
exportMethods("input_data<-")
exportMethods("llk<-")
exportMethods("model_pars<-")
exportMethods("mu<-")
exportMethods("normdata<-")
exportMethods("pi<-")
exportMethods("rawdata<-")
exportMethods("theta<-")
exportMethods(coefficients)
exportMethods(converge)
exportMethods(ecdf)
exportMethods(final_df)
exportMethods(input_data)
exportMethods(llk)
exportMethods(model_pars)
exportMethods(mu)
exportMethods(normdata)
exportMethods(pi)
exportMethods(rawdata)
exportMethods(theta)
import(matrixStats)
import(methods)
import(microbiome)
import(phyloseq)
importClassesFrom(S4Vectors,character_OR_NULL)
importFrom(BiocGenerics,as.data.frame)
importFrom(BiocGenerics,duplicated)
importFrom(BiocGenerics,sort)
importFrom(BiocGenerics,updateObject)
importFrom(S4Vectors,new2)
importFrom(S4Vectors,setValidity2)
importFrom(ggplot2,aes)
importFrom(ggplot2,aes_string)
importFrom(ggplot2,geom_abline)
importFrom(ggplot2,geom_density)
importFrom(ggplot2,geom_point)
importFrom(ggplot2,geom_smooth)
importFrom(ggplot2,ggplot)
importFrom(ggplot2,ggtitle)
importFrom(ggplot2,labs)
importFrom(ggplot2,scale_color_brewer)
importFrom(ggplot2,scale_x_continuous)
importFrom(ggplot2,scale_y_continuous)
importFrom(ggplot2,stat_ellipse)
importFrom(ggplot2,theme_classic)
importFrom(stats,.getXlevels)
importFrom(stats,dnbinom)
importFrom(stats,model.matrix)
importFrom(stats,model.response)
importFrom(stats,model.weights)
importFrom(stats,nlm)
importFrom(stats,optim)
importFrom(stats,pchisq)
importFrom(stats,pnbinom)
importFrom(stats,qnorm)
importFrom(stats,runif)
importFrom(stats,terms)
importFrom(stats,update)
importFrom(utils,data)
importFrom(vegan,metaMDS)
importFrom(vegan,vegdist)
