R: Statistical Tools for Topological Data Analysis

# Statistical Tools for Topological Data Analysis

## Documentation for package ‘TDA’ version 1.9.4

- DESCRIPTION file
- User guides, package vignettes and other documentation
- Package NEWS
- Package README

## Help Pages

TDA-package | Statistical Tools for Topological Data Analysis
alphaComplexDiag | Alpha Complex Persistence Diagram
alphaComplexFiltration | Alpha Complex Filtration
alphaShapeDiag | Persistence Diagram of Alpha Shape in 3d
alphaShapeFiltration | Alpha Shape Filtration in 3d
bootstrapBand | Bootstrap Confidence Band
bootstrapDiagram | Bootstrapped Confidence Set for a Persistence Diagram, using the Bottleneck Distance (or the Wasserstein distance).
bottleneck | Bottleneck distance between two persistence diagrams
circleUnif | Uniform Sample From The Circle
clusterTree | Density clustering: the cluster tree
distFct | Distance function
dtm | Distance to Measure Function
filtrationDiag | Persistence Diagram of Filtration
funFiltration | Filtration from function values
gridDiag | Persistence Diagram of a function over a Grid
gridFiltration | Persistence Diagram of a function over a Grid
hausdInterval | Subsampling Confidence Interval for the Hausdorff Distance between a Manifold and a Sample
kde | Kernel Density Estimator over a Grid of Points
kernelDist | Kernel distance over a Grid of Points
knnDE | k Nearest Neighbors Density Estimator over a Grid of Points
landscape | The Persistence Landscape Function
maxPersistence | Maximal Persistence Method
multipBootstrap | Multiplier Bootstrap for Persistence Landscapes and Silhouettes
plot.clusterTree | Plots the Cluster Tree
plot.diagram | Plot the Persistence Diagram
plot.maxPersistence | Summary plot for the maxPersistence function
print.clusterTree | Density clustering: the cluster tree
print.diagram | 'print' and 'summary' for 'diagram'
print.maxPersistence | Maximal Persistence Method
print.summary.diagram | 'print' and 'summary' for 'diagram'
print.summary.maxPersistence | Maximal Persistence Method
ripsDiag | Rips Persistence Diagram
ripsFiltration | Rips Filtration
silhouette | The Persistence Silhouette Function
sphereUnif | Uniform Sample From The Sphere S^d
summary.diagram | 'print' and 'summary' for 'diagram'
summary.maxPersistence | Maximal Persistence Method
TDA | Statistical Tools for Topological Data Analysis
torusUnif | Uniform Sample From The 3D Torus
wasserstein | Wasserstein distance between two persistence diagrams