Package: TAD
Title: Realize the Trait Abundance Distribution
Version: 1.0.1
Maintainer: Raphaël Martin <raphael.martin@inrae.fr>
Authors@R: 
    c(person(given = "Nathan",
             family = "Rondeau",
             email = "nathan.rondeau@inrae.fr",
             role = c("aut")
    ), person(given = "Yoann",
             family = "Le Bagousse-Pinguet",
             email = "yoann.pinguet@imbe.fr",
             role = c("aut"),
             comment = c(ORCID = "0000-0002-5615-5541")
    ), person(given = "Raphaël",
             family = "Martin",
             email = "raphael.martin@inrae.fr",
             role = c("aut","cre"),
             comment = c(ORCID = "0000-0001-8778-7915")
    ), person(given = "Lain",
             family = "Pavot",
             email = "lain.pavot@inrae.fr",
             role = c("aut")
    ), person(given = "Pierre",
             family = "Liancourt",
             email = "pierre.liancourt@gmail.com",
             role = c("aut"),
             comment = c(ORCID = "0000-0002-3109-8755")
    ), person(given = "Nicolas",
             family = "Gross",
             email = "nicolas.gross@inrae.fr",
             role = c("aut"),
             comment = c(ORCID = "0000-0001-9730-3240")
    ), person(given = "INRAe/UREP",
             role = c("cph")))
Description: The “TAD” package compiled an analytical framework based on an analysis of the shape of the trait abundance distributions to better understand community assembly processes, and predict community dynamics under environmental changes. This framework mobilized a study of the relationship between the moments describing the shape of the distributions: the skewness and the kurtosis (SKR). The SKR allows the identification of commonalities in the shape of trait distributions across contrasting communities. Derived from the SKR, we developed mathematical parameters that summarise the complex pattern of distributions by assessing (i) the R², (ii) the Y-intercept, (iii) the slope, (iv) the functional stability of community (TADstab), and, (v) the distance from specific distribution families (i.e., the distance from the skew-uniform family a limit to the highest degree of evenness: TADeve).
License: BSD_3_clause + file LICENSE
URL: https://forge.inrae.fr/urep/data_processing/tad
BugReports: https://forge.inrae.fr/urep/data_processing/tad/-/issues
Encoding: UTF-8
RoxygenNote: 7.3.3
Depends: R (>= 3.5)
Imports: doFuture, foreach, mblm (>= 0.12), methods, stats
Suggests: Cairo, covr, dplyr, devtools, future (>= 1.33), ggplot2 (>=
        3.5), ggpubr (>= 0.6), knitr, Matrix (>= 1.6), pkgdown, rlang,
        rmarkdown, roxygen2, testthat (>= 3.0), tinytex
Collate: utils.R saving_and_loading_data.R graph.R tad.R data.R
Config/testthat/edition: 3
Config/testthat/parallel: true
Language: en-US
VignetteBuilder: knitr
LazyData: true
LazyDataCompression: bzip2
NeedsCompilation: no
Packaged: 2026-02-19 10:07:20 UTC; ramartin
Author: Nathan Rondeau [aut],
  Yoann Le Bagousse-Pinguet [aut] (ORCID:
    <https://orcid.org/0000-0002-5615-5541>),
  Raphaël Martin [aut, cre] (ORCID:
    <https://orcid.org/0000-0001-8778-7915>),
  Lain Pavot [aut],
  Pierre Liancourt [aut] (ORCID: <https://orcid.org/0000-0002-3109-8755>),
  Nicolas Gross [aut] (ORCID: <https://orcid.org/0000-0001-9730-3240>),
  INRAe/UREP [cph]
Repository: CRAN
Date/Publication: 2026-02-19 14:00:02 UTC
Built: R 4.6.0; ; 2026-04-26 10:46:32 UTC; unix
