# Generated by roxygen2: do not edit by hand

S3method(as.data.frame,SimInf_abc)
S3method(as.data.frame,SimInf_events)
S3method(as.data.frame,SimInf_individual_events)
S3method(as.data.frame,SimInf_pmcmc)
export("gdata<-")
export("punchcard<-")
export("select_matrix<-")
export("shift_matrix<-")
export("u0<-")
export("v0<-")
export(C_code)
export(SEIR)
export(SIR)
export(SIS)
export(SISe)
export(SISe3)
export(SISe3_sp)
export(SISe_sp)
export(SimInf_events)
export(SimInf_model)
export(abc)
export(add_spatial_coupling_to_ldata)
export(continue_abc)
export(continue_pmcmc)
export(distance_matrix)
export(edge_properties_to_matrix)
export(events)
export(events_SEIR)
export(events_SIR)
export(events_SIS)
export(events_SISe)
export(gdata)
export(get_individuals)
export(indegree)
export(individual_events)
export(lambertW0)
export(ldata)
export(mparse)
export(n_compartments)
export(n_generations)
export(n_nodes)
export(n_replicates)
export(node_events)
export(outdegree)
export(package_skeleton)
export(pfilter)
export(pmcmc)
export(select_matrix)
export(set_num_threads)
export(shift_matrix)
export(u0)
export(u0_SEIR)
export(u0_SIR)
export(u0_SIS)
export(u0_SISe)
exportClasses(SEIR)
exportClasses(SIR)
exportClasses(SIS)
exportClasses(SISe)
exportClasses(SISe3)
exportClasses(SISe3_sp)
exportClasses(SISe_sp)
exportClasses(SimInf_abc)
exportClasses(SimInf_events)
exportClasses(SimInf_individual_events)
exportClasses(SimInf_model)
exportClasses(SimInf_pfilter)
exportClasses(SimInf_pmcmc)
exportMethods("gdata<-")
exportMethods("punchcard<-")
exportMethods("select_matrix<-")
exportMethods("shift_matrix<-")
exportMethods("u0<-")
exportMethods("v0<-")
exportMethods(abc)
exportMethods(boxplot)
exportMethods(continue_abc)
exportMethods(continue_pmcmc)
exportMethods(events)
exportMethods(gdata)
exportMethods(get_individuals)
exportMethods(ldata)
exportMethods(length)
exportMethods(logLik)
exportMethods(n_compartments)
exportMethods(n_generations)
exportMethods(n_nodes)
exportMethods(n_replicates)
exportMethods(node_events)
exportMethods(pairs)
exportMethods(pfilter)
exportMethods(plot)
exportMethods(pmcmc)
exportMethods(prevalence)
exportMethods(run)
exportMethods(select_matrix)
exportMethods(shift_matrix)
exportMethods(show)
exportMethods(summary)
exportMethods(trajectory)
exportMethods(u0)
importClassesFrom(Matrix,dgCMatrix)
importFrom(MASS,ginv)
importFrom(MASS,kde2d)
importFrom(Matrix,Matrix)
importFrom(Matrix,sparseMatrix)
importFrom(digest,digest)
importFrom(grDevices,adjustcolor)
importFrom(grDevices,rainbow)
importFrom(graphics,boxplot)
importFrom(graphics,contour)
importFrom(graphics,grconvertY)
importFrom(graphics,legend)
importFrom(graphics,lines)
importFrom(graphics,mtext)
importFrom(graphics,pairs)
importFrom(graphics,par)
importFrom(graphics,plot)
importFrom(graphics,polygon)
importFrom(graphics,rug)
importFrom(methods,"slot<-")
importFrom(methods,as)
importFrom(methods,is)
importFrom(methods,new)
importFrom(methods,show)
importFrom(methods,slot)
importFrom(methods,validObject)
importFrom(stats,ave)
importFrom(stats,cov)
importFrom(stats,density)
importFrom(stats,dgamma)
importFrom(stats,dlnorm)
importFrom(stats,dnorm)
importFrom(stats,dunif)
importFrom(stats,logLik)
importFrom(stats,optim)
importFrom(stats,quantile)
importFrom(stats,rgamma)
importFrom(stats,rlnorm)
importFrom(stats,rnorm)
importFrom(stats,runif)
importFrom(stats,var)
importFrom(stats,xtabs)
importFrom(tools,Rcmd)
importFrom(utils,capture.output)
importFrom(utils,data)
importFrom(utils,getParseData)
importFrom(utils,packageVersion)
importFrom(utils,setTxtProgressBar)
importFrom(utils,txtProgressBar)
useDynLib(SimInf, .registration=TRUE)
