Package: SimBIID
Title: Simulation-Based Inference Methods for Infectious Disease Models
Version: 0.2.2
Authors@R: c(person("Trevelyan J.", "McKinley", email = "t.mckinley@exeter.ac.uk",
                role = c("aut", "cre")),
             person("Stefan", "Widgren", role = "aut", email = "stefan.widgren@gmail.com", 
                comment = "Author of 'R/mparse.R'"),
            person("Pavol", "Bauer", role = "cph", comment = 'R/mparse.R'),
            person("Robin", "Eriksson", role = "cph", comment = 'R/mparse.R'),
            person("Stefan", "Engblom", role = "cph", comment = 'R/mparse.R'))
Description: Provides some code to run simulations of state-space models, and then
             use these in the Approximate Bayesian Computation Sequential Monte Carlo (ABC-SMC) 
             algorithm of Toni et al. (2009) <doi:10.1098/rsif.2008.0172> and a bootstrap particle
             filter based particle Markov chain Monte Carlo (PMCMC) algorithm 
             (Andrieu et al., 2010 <doi:10.1111/j.1467-9868.2009.00736.x>). 
             Also provides functions to plot and summarise the outputs.
License: GPL (>= 3)
URL: https://github.com/tjmckinley/SimBIID
BugReports: https://github.com/tjmckinley/SimBIID/issues
Depends: R (>= 3.5)
Imports: stats, dplyr, purrr, tibble, ggplot2, tidyr, mvtnorm,
        grDevices, RColorBrewer, Rcpp, RcppXPtrUtils, coda
Suggests: parallel, GGally, testthat
LinkingTo: Rcpp, RcppArmadillo
Config/testthat/edition: 3
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.3.2
NeedsCompilation: yes
Packaged: 2025-04-03 10:02:34 UTC; tj
Author: Trevelyan J. McKinley [aut, cre],
  Stefan Widgren [aut] (Author of 'R/mparse.R'),
  Pavol Bauer [cph] (R/mparse.R),
  Robin Eriksson [cph] (R/mparse.R),
  Stefan Engblom [cph] (R/mparse.R)
Maintainer: Trevelyan J. McKinley <t.mckinley@exeter.ac.uk>
Repository: CRAN
Date/Publication: 2025-04-03 10:20:02 UTC
Built: R 4.6.0; aarch64-apple-darwin23; 2026-04-26 21:38:12 UTC; unix
Archs: SimBIID.so.dSYM
