R: SHAP Plots for 'XGBoost'

# SHAP Plots for 'XGBoost'

## Documentation for package ‘SHAPforxgboost’ version 0.2.0

- DESCRIPTION file
- User guides, package vignettes and other documentation
- Package NEWS
- Package README

## Help Pages

dataXY_df | Terra satellite data (X,Y) for running the xgboost model .
label.feature | Modify labels for features under plotting
labels_within_package | labels_within_package: Some labels package auther defined to make his plot, mainly serve the paper publication.
new_labels | new_labels: a place holder default to NULL.
plot.label | Internal-function to revise axis label for each feature
scatter.plot.diagonal | Make customized scatter plot with diagonal line and R2 printed.
scatter.plot.simple | Simple scatter plot, adding marginal histogram by default.
shap.importance | Variable importance as measured by mean absolute SHAP value.
shap.plot.dependence | SHAP dependence and interaction plots
shap.plot.force_plot | Create SHAP force plot (stacked bar chart)
shap.plot.force_plot_bygroup | Create faceted SHAP force plots by cluster
shap.plot.summary | SHAP summary plot using long-format SHAP values
shap.plot.summary.wrap1 | A wrapped function to make summary plot from model object and predictors
shap.plot.summary.wrap2 | A wrapped function to make summary plot from given SHAP values matrix
shap.prep | Prepare SHAP values into long format for plotting
shap.prep.interaction | Prepare the interaction SHAP values from predict.xgb.Booster
shap.prep.stack.data | Prepare data for SHAP force plot (stacked bar chart)
shap.values | Get SHAP scores from a trained XGBoost or LightGBM model
shap_int_iris | The interaction effect SHAP values example using iris dataset.
shap_long_iris | The long-format SHAP values example using iris dataset.
shap_score | SHAP values example from dataXY_df .
shap_values_iris | SHAP values example using iris dataset.