RTMB-package	RTMB-package
$.Tape	Tape
%*%,ad,ad-method	ADmatrix
%*%,ad,anysparse-method	ADmatrix
%*%,adcomplex,ANY-method	ADcomplex
%*%,adsparse,adsparse-method	ADmatrix
%*%,anysparse,ad-method	ADmatrix
%~%	grapes-twiddle-grapes
*.adcomplex	ADcomplex
+.adcomplex	ADcomplex
-.adcomplex	ADcomplex
/.adcomplex	ADcomplex
AD	AD
ADapply	ADapply
ADcomplex	ADcomplex
adcomplex	ADcomplex
ADconstruct	ADconstruct
ADintegrate	ADintegrate
ADjoint	ADjoint
ADmatrix	ADmatrix
ADoverload	ADoverload
ADREPORT	TMB-interface
ADsparse	ADsparse
adsparse	ADsparse
ADuniroot	ADuniroot
ADvector	ADvector
advector	ADvector
aperm.advector	ADvector
apply,advector-method	ADapply
Arg.adcomplex	ADcomplex
as.array.simref	Simulation
as.complex.advector	ADvector
as.double.advector	ADvector
as.matrix.adcomplex	ADcomplex
as.matrix.adsparse	ADmatrix
as.vector.adcomplex	ADcomplex
as.vector.advector	ADvector
band,adsparse-method	ADmatrix
besselI,ad,ad-method	Distributions
besselI,num,num-method	Distributions
besselJ,ad,ad-method	Distributions
besselJ,num,num-method	Distributions
besselK,ad,ad-method	Distributions
besselK,num,num-method	Distributions
besselY,ad,ad-method	Distributions
besselY,num,num-method	Distributions
c.advector	ADvector
cbind.advector	ADmatrix
checkConsistency	TMB-interface
chol.advector	ADmatrix
colSums,adcomplex-method	ADcomplex
colSums,adsparse-method	ADmatrix
colSums,advector-method	ADmatrix
Complex.advector	ADvector
Conj.adcomplex	ADcomplex
cov2cor,advector-method	ADmatrix
crossprod,ad,ad.-method	ADmatrix
DataEval	Tape
dautoreg	MVgauss
dbeta,ad,ad,ad,missing,logical.-method	Distributions
dbeta,num,num,num,missing,logical.-method	Distributions
dbeta,osa,ANY,ANY,ANY,ANY-method	Distributions
dbeta,simref,ANY,ANY,ANY,ANY-method	Distributions
dbinom,ad,ad,ad,logical.-method	Distributions
dbinom,num,num,num,logical.-method	Distributions
dbinom,osa,ANY,ANY,ANY-method	Distributions
dbinom,simref,ANY,ANY,ANY-method	Distributions
dbinom_robust	Distributions
dcauchy,ad,ad.,ad.,logical.-method	Distributions
dcauchy,num,num.,num.,logical.-method	Distributions
dcauchy,osa,ANY,ANY,ANY-method	Distributions
dcauchy,simref,ANY,ANY,ANY-method	Distributions
dchisq,ANY,ANY,missing-method	Distributions
dchisq,num,num,num.-method	Distributions
dcompois	Distributions
dcompois2	Distributions
determinant.advector	ADmatrix
dexp,ad,ad.,logical.-method	Distributions
dexp,num,num.,logical.-method	Distributions
dexp,osa,ANY,ANY-method	Distributions
dexp,simref,ANY,ANY-method	Distributions
df,ad,ad,ad,missing,logical.-method	Distributions
df,num,num,num,missing,logical.-method	Distributions
df,osa,ANY,ANY,ANY,ANY-method	Distributions
df,simref,ANY,ANY,ANY,ANY-method	Distributions
dgamma,ad,ad,ad,missing,logical.-method	Distributions
dgamma,ad,ad,missing,ad.,logical.-method	Distributions
dgamma,num,num,missing,num.,logical.-method	Distributions
dgamma,osa,ANY,ANY,ANY,ANY-method	Distributions
dgamma,simref,ANY,ANY,ANY,ANY-method	Distributions
dgmrf	MVgauss
diag,adcomplex,ANY,ANY-method	ADcomplex
diag,adsparse,missing,missing-method	ADmatrix
diag,advector,ANY,ANY-method	ADconstruct
diff.advector	ADvector
diff.simref	Simulation
dim,adsparse-method	ADmatrix
dim.adcomplex	ADcomplex
dim.osa	OSA-residuals
dim.simref	Simulation
dim<-.adcomplex	ADcomplex
dim<-.simref	Simulation
Distributions	Distributions
dlgamma	Distributions
dlnorm,ANY,ANY,ANY,ANY-method	Distributions
dlnorm,num,num.,num.,logical.-method	Distributions
dlnorm,osa,ANY,ANY,ANY-method	Distributions
dlogis,ad,ad.,ad.,logical.-method	Distributions
dlogis,num,num.,num.,logical.-method	Distributions
dlogis,osa,ANY,ANY,ANY-method	Distributions
dlogis,simref,ANY,ANY,ANY-method	Distributions
dmultinom,ad,ad.,ad,logical.-method	Distributions
dmultinom,ANY,ANY,ANY,ANY-method	Distributions
dmultinom,num,num.,num,logical.-method	Distributions
dmultinom,osa,ANY,ANY,ANY-method	Distributions
dmultinom,simref,ANY,ANY,ANY-method	Distributions
dmvnorm	MVgauss
dnbinom,ad,ad,ad,missing,logical.-method	Distributions
dnbinom,num,num,num,missing,logical.-method	Distributions
dnbinom,osa,ANY,ANY,ANY,ANY-method	Distributions
dnbinom,simref,ANY,ANY,ANY,ANY-method	Distributions
dnbinom2	Distributions
dnbinom_robust	Distributions
dnorm,ad,ad.,ad.,logical.-method	Distributions
dnorm,num,num.,num.,logical.-method	Distributions
dnorm,osa,ANY,ANY,ANY-method	Distributions
dnorm,simref,ANY,ANY,ANY-method	Distributions
dpois,ad,ad,logical.-method	Distributions
dpois,num,num,logical.-method	Distributions
dpois,osa,ANY,ANY-method	Distributions
dpois,simref,ANY,ANY-method	Distributions
dseparable	MVgauss
dSHASHo	Distributions
dsn	Distributions
dt,ad,ad,missing,logical.-method	Distributions
dt,num,num,missing,logical.-method	Distributions
dt,osa,ANY,ANY,ANY-method	Distributions
dt,simref,ANY,ANY,ANY-method	Distributions
dtweedie	Distributions
dweibull,ad,ad,ad.,logical.-method	Distributions
dweibull,num,num,num.,logical.-method	Distributions
dweibull,osa,ANY,ANY,ANY-method	Distributions
dweibull,simref,ANY,ANY,ANY-method	Distributions
eigen,adcomplex-method	ADmatrix
eigen,advector-method	ADmatrix
exp.adcomplex	ADcomplex
expAv	expAv
expm,adsparse-method	ADmatrix
expm,advector-method	ADmatrix
fft,adcomplex-method	ADcomplex
fft,advector-method	ADcomplex
findInterval,advector,advector-method	ADvector
getAll	TMB-interface
GetTape	Tape
ifelse,num,ad,ad-method	ADvector
ifelse,num,num,num-method	ADvector
Im.adcomplex	ADcomplex
integrate,ANY-method	ADintegrate
interpol1Dfun	Interpolation
interpol2Dfun	Interpolation
Interpolation	Interpolation
is.array.osa	OSA-residuals
is.array.simref	Simulation
is.finite.advector	ADvector
is.infinite.advector	ADvector
is.matrix.adcomplex	ADcomplex
is.matrix.osa	OSA-residuals
is.matrix.simref	Simulation
is.na.advector	ADvector
is.na.simref	Simulation
is.nan.advector	ADvector
is.numeric.advector	ADvector
lbeta,ad,ad-method	Distributions
lbeta,num,num-method	Distributions
length.adcomplex	ADcomplex
length.osa	OSA-residuals
length.simref	Simulation
length<-.advector	ADvector
log.adcomplex	ADcomplex
logspace_add	Distributions
logspace_sub	Distributions
MakeADFun	TMB-interface
MakeTape	Tape
Math,adsparse-method	ADmatrix
Math.advector	ADvector
Math.simref	Simulation
matrix,advector-method	ADconstruct
matrix,num.-method	ADconstruct
max.advector	ADvector
mean.advector	ADvector
min.advector	ADvector
Mod.adcomplex	ADcomplex
MVgauss	MVgauss
OBS	TMB-interface
oneStepPredict	OSA-residuals
Ops,adcomplex,advector-method	ADcomplex
Ops,advector,adcomplex-method	ADcomplex
Ops.advector	ADvector
Ops.simref	Simulation
order,missing,missing,missing-method	ADvector
OSA-residuals	OSA-residuals
pbeta,ad,ad,ad,missing,missing,missing-method	Distributions
pbeta,num,num,num,missing,missing,missing-method	Distributions
pbinom,ad,ad,ad,missing,missing-method	Distributions
pbinom,num,num,num,missing,missing-method	Distributions
pchisq,ANY,ANY,missing,missing,missing-method	Distributions
pchisq,num,num,num.,missing,missing-method	Distributions
pexp,ad,ad.,missing,missing-method	Distributions
pexp,num,num.,missing,missing-method	Distributions
pgamma,ad,ad,ad,missing,missing,missing-method	Distributions
pgamma,ad,ad,missing,ad.,missing,missing-method	Distributions
pgamma,num,num,missing,num.,missing,missing-method	Distributions
plogis,advector,missing,missing,missing,missing-method	Distributions
pnbinom,ad,ad,ad,missing,missing,missing-method	Distributions
pnorm,ad,ad.,ad.-method	Distributions
pnorm,num,num.,num.-method	Distributions
ppois,ad,ad,missing,missing-method	Distributions
ppois,num,num,missing,missing-method	Distributions
print.advector	ADvector
print.Tape	Tape
prod.advector	ADvector
pweibull,ad,ad,ad.,missing,missing-method	Distributions
pweibull,num,num,num.,missing,missing-method	Distributions
qbeta,ad,ad,ad,missing,missing,missing-method	Distributions
qbeta,num,num,num,missing,missing,missing-method	Distributions
qchisq,ANY,ANY,missing,missing,missing-method	Distributions
qchisq,num,num,num.,missing,missing-method	Distributions
qexp,ad,ad.,missing,missing-method	Distributions
qexp,num,num.,missing,missing-method	Distributions
qgamma,ad,ad,ad,missing,missing,missing-method	Distributions
qgamma,ad,ad,missing,ad.,missing,missing-method	Distributions
qgamma,num,num,missing,num.,missing,missing-method	Distributions
qlogis,advector,missing,missing,missing,missing-method	Distributions
qnorm,ad,ad.,ad.,missing,missing-method	Distributions
qnorm,num,num.,num.,missing,missing-method	Distributions
qweibull,ad,ad,ad.,missing,missing-method	Distributions
qweibull,num,num,num.,missing,missing-method	Distributions
rbind.advector	ADmatrix
Re.adcomplex	ADcomplex
rep.adcomplex	ADcomplex
rep.advector	ADvector
REPORT	TMB-interface
rowSums,adcomplex-method	ADcomplex
rowSums,adsparse-method	ADmatrix
rowSums,advector-method	ADmatrix
RTMB	RTMB-package
sapply,ANY-method	ADapply
sdreport	TMB-interface
show,adcomplex-method	ADcomplex
simref	Simulation
Simulation	Simulation
solve,ad,ad.-method	ADmatrix
solve,adcomplex,ANY-method	ADcomplex
solve,anysparse,ad.-method	ADmatrix
solve,num,num.-method	ADmatrix
sort,advector-method	ADvector
splinefun,ad,ad,ANY,missing-method	Interpolation
splinefun,ad,missing,ANY,missing-method	Interpolation
sqrt.adcomplex	ADcomplex
sum.advector	ADvector
Summary.advector	ADvector
Summary.simref	Simulation
svd,advector-method	ADmatrix
t.adcomplex	ADcomplex
t.adsparse	ADmatrix
t.simref	Simulation
Tape	Tape
TapeConfig	Tape
tcrossprod,ad,ad.-method	ADmatrix
TMB-interface	TMB-interface
tril,adsparse-method	ADmatrix
triu,adsparse-method	ADmatrix
uniroot,ANY-method	ADuniroot
unstructured	MVgauss
Vectorize,ANY-method	ADapply
[,advector,advector,ANY,ANY-method	ADvector
[.adcomplex	ADcomplex
[.adsparse	ADmatrix
[.advector	ADvector
[.osa	OSA-residuals
[.simref	Simulation
[<-.adcomplex	ADcomplex
[<-.adsparse	ADmatrix
[<-.advector	ADvector
[<-.simref	Simulation
[[.advector	ADvector
