Package: PeakSegJoint
Authors@R: person(
 given = c("Toby", "Dylan"),
 family = "Hocking",
 role = c("aut", "cre"),
 email = "toby.hocking@r-project.org")
Version: 2024.12.4
License: GPL-3
URL: https://github.com/tdhock/PeakSegJoint
BugReports: https://github.com/tdhock/PeakSegJoint/issues
Title: Joint Peak Detection in Several ChIP-Seq Samples
Description: Jointly segment several ChIP-seq samples to find the peaks 
 which are the same and different across samples. The fast approximate
 maximum Poisson likelihood algorithm is described in
 "PeakSegJoint: fast supervised peak detection via joint segmentation
 of multiple count data samples"
 <doi:10.48550/arXiv.1506.01286>
 by TD Hocking and G Bourque.
Suggests: testthat, ggplot2 (>= 2.0), microbenchmark
Depends: R (>= 2.14)
Imports: PeakError, parallel, penaltyLearning
NeedsCompilation: yes
Packaged: 2024-12-04 19:58:40 UTC; hoct2726
Author: Toby Dylan Hocking [aut, cre]
Maintainer: Toby Dylan Hocking <toby.hocking@r-project.org>
Repository: CRAN
Date/Publication: 2024-12-04 20:20:02 UTC
Built: R 4.6.0; aarch64-apple-darwin23; 2026-04-26 14:26:16 UTC; unix
Archs: PeakSegJoint.so.dSYM
