Rank                    Ranking a vector
as_igraph               Convert plexi graph data to igraph
as_plexi_graph          Convert adjacency matrix to plexi graph data
distance                Function to calculate distance between two
                        vectors
ednn                    Encoder decoder neural network (EDNN) function
ednn_io_prepare         Preparing the input and output of the EDNN for
                        a multiplex graph
example_data            Example Data
network_gen             Multiplex Network Generation
p_val_count             Calculate p.value for x given set of null
                        values using counts
p_val_norm              Calculate p.value for x given set of null
                        values using a Gaussian null pdf
p_val_rank              Calculate p.value for x given a set of null
                        values using ranks
plexi_distance_test1_isn
                        Test the extremeness of embedding distances of
                        local neighbors.
plexi_distance_test_isn
                        Test the embedding distances of local neighbors
                        change between the two conditions for ISNs.
plexi_embedding         Calculate the embedding space for a multiplex
                        network
plexi_embedding_2layer
                        Calculate the embedding space for a two layer
                        multiplex network
plexi_node_detection_2layer
                        Detecting the nodes whose local neighbors
                        change bweteen the two conditions.
plexi_node_distance     Detecting the nodes whose local neighbors
                        change between the two conditions for ISNs.
rep_random_walk         Repetitive Fixed-length (weighted) random walk
                        algorithm
subgraph_difference_plot
                        Visualization of a difference subgroup using a
                        circular graph
subgraph_plot           Visualization of a subgroup using a circular
                        graph
weightd_random_walk     Weighted Random Walk algorithm
