# Generated by roxygen2: do not edit by hand

S3method("$",shaidyRepo)
S3method("+",ngchmAxis)
S3method("+",ngchmVersion2)
S3method(as.dendrogram,shaid)
S3method(as.hclust,shaid)
S3method(dim,ngchmLayer)
S3method(dim,ngchmVersion2)
S3method(dimnames,ngchmLayer)
S3method(dimnames,ngchmVersion2)
S3method(getDimensions,Seurat)
S3method(getDimensions,default)
S3method(getDimensions,prcomp)
S3method(getDimensions,umap)
S3method(plot,ngchmVersion2)
S3method(print,ngchm.type.info)
S3method(print,shaidyRepo)
export("chmColorMap<-")
export("chmColors<-")
export("chmLabel<-")
export("chmLayer<-")
export("chmProperty<-")
export(chmAddPCA)
export(chmAddReducedDim)
export(chmAddTSNE)
export(chmAddUMAP)
export(chmAddUWOT)
export(chmAxis)
export(chmAxisType)
export(chmBrowse)
export(chmColorMap)
export(chmColors)
export(chmCovariate)
export(chmCovariateBar)
export(chmCreateCollection)
export(chmCreateManagedServer)
export(chmCreateServer)
export(chmCurrentCollection)
export(chmCurrentServer)
export(chmDefaultColOrder)
export(chmDefaultRowOrder)
export(chmExportToFile)
export(chmExportToHTML)
export(chmExportToPDF)
export(chmFieldAccessFunction)
export(chmGetDeployServerConfig)
export(chmGetFunction)
export(chmGetOverview)
export(chmGetTypeInfo)
export(chmLabel)
export(chmLayer)
export(chmListFunctions)
export(chmListServers)
export(chmListTypes)
export(chmLoadShaidyCHM)
export(chmManager)
export(chmNew)
export(chmNewColorMap)
export(chmNewCovariate)
export(chmNewCovariateBar)
export(chmNewDataLayer)
export(chmNewDataset)
export(chmNewDialog)
export(chmNewFunction)
export(chmNewProperty)
export(chmNewServer)
export(chmOriginalColOrder)
export(chmOriginalRowOrder)
export(chmProperties)
export(chmProperty)
export(chmRandomColOrder)
export(chmRandomRowOrder)
export(chmRegisterAxisFunction)
export(chmRegisterFunction)
export(chmRegisterGetMetadataFunction)
export(chmRegisterMatrixFunction)
export(chmRegisterToolboxFunction)
export(chmRegisterType)
export(chmRegisterTypeMapper)
export(chmRegisterTypeSplitter)
export(chmServer)
export(chmSetCollection)
export(chmSetDeployServerConfig)
export(chmStringopFunction)
export(chmTreeGaps)
export(chmWriteCustomJS)
export(getDimensions)
export(initLogging)
export(ngchmAddDatasetBlob)
export(ngchmAddMatrixToCollection)
export(ngchmAddObjectToCollection)
export(ngchmCollectionInCollection)
export(ngchmCollectionTree)
export(ngchmCreateServerProtocol)
export(ngchmFindRepo)
export(ngchmGetDataFileShaid)
export(ngchmGetEnv)
export(ngchmGetHandleHTTR)
export(ngchmGetLabels)
export(ngchmGetLabelsStr)
export(ngchmGetProtoParam)
export(ngchmGetServerProtocol)
export(ngchmInitShaidyRepository)
export(ngchmListServerProtocols)
export(ngchmLoadDatasetBlob)
export(ngchmNewCollection)
export(ngchmProtoParamCheck)
export(ngchmPushSourceRepository)
export(ngchmPushSourceServer)
export(ngchmPushTempRepository)
export(ngchmRegisterServer)
export(ngchmRenderChm)
export(ngchmResponseJSON)
export(ngchmSaveAsDatasetBlob)
export(ngchmSaveAsDendrogramBlob)
export(ngchmTileDataset)
export(ngchmUnregisterServer)
export(shaidyAddFileBlob)
export(shaidyBlobExists)
export(shaidyCopyBlob)
export(shaidyFindRepo)
export(shaidyInitRepository)
export(shaidyLoadRepository)
export(shaidyProvenance)
exportClasses(ngchm)
exportClasses(ngchmAxis)
exportClasses(ngchmBar)
exportClasses(ngchmCSS)
exportClasses(ngchmColormap)
exportClasses(ngchmCovariate)
exportClasses(ngchmDataset)
exportClasses(ngchmDialog)
exportClasses(ngchmJS)
exportClasses(ngchmLayer)
exportClasses(ngchmMenuItem)
exportClasses(ngchmMetaData)
exportClasses(ngchmOverview)
exportClasses(ngchmProperty)
exportClasses(ngchmRelated)
exportClasses(ngchmRelatedGroup)
exportClasses(ngchmServer)
exportClasses(ngchmServerProtocol)
exportClasses(ngchmTemplate)
exportMethods("+")
exportMethods("chmColOrder<-")
exportMethods("chmRowOrder<-")
exportMethods(chmAdd)
exportMethods(chmAddAxisType)
exportMethods(chmAddCSS)
exportMethods(chmAddColormap)
exportMethods(chmAddCovariate)
exportMethods(chmAddCovariateBar)
exportMethods(chmAddDataset)
exportMethods(chmAddDialog)
exportMethods(chmAddLayer)
exportMethods(chmAddMenuItem)
exportMethods(chmAddMetaData)
exportMethods(chmAddOverview)
exportMethods(chmAddProperty)
exportMethods(chmAddRelated)
exportMethods(chmAddRelatedGroup)
exportMethods(chmAddSpecificAxisTypeFunction)
exportMethods(chmAddTag)
exportMethods(chmAddTemplate)
exportMethods(chmAddToolboxR)
exportMethods(chmAddToolboxR2)
exportMethods(chmAddToolboxRC)
exportMethods(chmBindFunction)
exportMethods(chmDeployServer)
exportMethods(chmGetDataset)
exportMethods(chmGetProperty)
exportMethods(chmGetURL)
exportMethods(chmHasProperty)
exportMethods(chmInstall)
exportMethods(chmLoadCHM)
exportMethods(chmMake)
exportMethods(chmMakePrivate)
exportMethods(chmMakePublic)
exportMethods(chmName)
exportMethods(chmSetCredentials)
exportMethods(chmUninstall)
exportMethods(chmUrlBase)
exportMethods(shaidyGetComponents)
exportMethods(shaidyGetShaid)
import(digest)
import(htmltools)
import(httr)
import(jsonlite)
import(methods)
import(stats)
import(tsvio)
import(utils)
importFrom(logger,appender_console)
importFrom(logger,appender_file)
importFrom(logger,layout_glue)
importFrom(logger,layout_glue_generator)
importFrom(logger,log_appender)
importFrom(logger,log_debug)
importFrom(logger,log_error)
importFrom(logger,log_info)
importFrom(logger,log_layout)
importFrom(logger,log_threshold)
