AddBinVars2Biplot       Add suplementary binary variables to a biplot
AddCluster2Biplot       Add clusters to a biplot object
AddContVars2Biplot      Adds supplementary continuous variables to a
                        biplot object
AddOrdVars2Biplot       Adds supplementary ordinal variables to an
                        existing biplot objects.
AddSupVars2Biplot       Adds supplementary variables to a biplot object
Bartlett.Tests          Bartlett tests
BasicDescription        Basic descriptive sataistics
BinaryDistances         Binary Distances
BinaryLogBiplotEM       Binary logistic biplot with the EM algorithm.
BinaryLogBiplotGD       Binary Logistic Biplot with Gradient Descent
                        Estimation
BinaryLogBiplotGDRecursive
                        Binary Logistic Biplot with Recursive Gradient
                        Descent Estimation
BinaryLogBiplotJoint    Binary logistic biplot with a gradient descent
                        algorithm.
BinaryLogBiplotMirt     Binary logistic biplot with Item Response
                        Theory.
BinaryLogisticBiplot    Binary Logistic Biplot
BinaryPLSFit            Binary PLS Regression.
BinaryPLSR              Partial Least Squares Regression with Binary
                        Data
BinaryProximities       Proximity Measures for Binary Data
Biplot.BinaryPLSR       Biplot for a PLSR model with binary data
Biplot.PLSR             Partial Least Squares Biplot
Biplot.PLSR1BIN         Biplot for a PLSR model with a binary response
Biplot.PLSRBIN          Biplot for a PLSR model with binary responses
BiplotFPCA              External Biplot for functional data from a
                        functional PCA object.
BootstrapDistance       Bootstrap on the distance matrices used for
                        Principal Coordinates Analysis (PCoA)
BootstrapScalar         Bootstrap on the scalar product matrices used
                        for Principal Coordinates Analysis (PCoA)
BootstrapSmacof         Bootstrap on the distance matrices used for MDS
                        with Smacof
BoxPlotPanel            Panel of box plots
CA                      Correspondence Analysis
CCA                     Canonical Correspondence Analysis
Canonical.Variate.Analysis
                        Biplot representation of a Canonical Variate
                        Analysis or a Manova (Canonical-Biplot or
                        MANOVA-Biplot)
CanonicalBiplot         Biplot representation of a Canonical Variate
                        Analysis or a Manova (Canonical-Biplot or
                        MANOVA-Biplot)
CanonicalDistanceAnalysis
                        MANOVA and Canonical Analysis of Distances
CanonicalStatisBiplot   CANONICAL STATIS-ACT for multiple tables with
                        common rows and its associated Biplot
CategoricalDistances    Distances among individuals using nominal
                        variables.
CategoricalProximities
                        Proximities among individuals using nominal
                        variables.
CheckBinaryMatrix       Checks if a data matrix is binary
CheckBinaryVector       Checks if a vector is binary
Chemical                Chemical data
Circle                  Draws a circle
Coinertia               Coinertia Analysis.
ColContributionPlot     Plots the contributios of a biplot
ConcEllipse             Concentration ellipse for a se of
                        two-dimensional points
ConfidenceInterval      Confidence Interval for the mean
ConstrainedLogisticBiplot
                        Constrained Binary Logistic Biplot
ConstrainedOrdinalLogisticBiplot
                        Constrained Ordinal Logistic Biplot
ContinuousDistances     Distances for Continuous Data
ContinuousProximities   Proximities for Continuous Data
ContributionPlot        Contribution plots for several Biplots
Convert2ThreeWay        Three way array from a two way matrix
Convert3wArray2List     Converts a three way array into a list
ConvertFactors2Integers
                        Convert a factor to integer numbers
ConvertList23wArray     Converts a list of matrices into a three way
                        array
CorrelationCircle       Circle of correlations
CrissCross              Alternated Least Squares Biplot
CumSum                  Cummulative sums
DataFrame2Matrix4Regression
                        Prepares a matrix for regression from a data
                        frame
Dataframe2BinaryMatrix
                        Converts a Data Frame into a Binary Data Matrix
DensityBiplot           Adds Non-parametric densities to a biplot.
                        Separated densities are calculated for
                        different clusters
Dhats                   Calculation of Disparities
DimensionLabels         Labels for the selected dimensions in a biplot
Doctors                 Data set extracted from the Careers of
                        doctorate holders survey carried out by Spanish
                        Statistical Office in 2008.
DoctorsNUM              Data set extracted from the Careers of
                        doctorate holders survey carried out by Spanish
                        Statistical Office in 2008, numerical data.
ErrorBarPlotPanel       Plots a panel of error bars
EuclideanDistance       Classical Euclidean Distance (Pythagorean
                        Distance)
ExpandTable             Expands a compressed table of patterns and
                        frequencies
ExternalBinaryLogisticBiplot
                        External Logistic Biplot for binary Data
ExtractTable            Extracts unique patterns and its frequencies
                        for a discrete data matrix (numeric)
FA.Biplot               Biplot for Factor Analysis.
Factor2Binary           Converts a Factor into its indicator matrix
Fraction                Selection of a fraction of the data
GD.Biplot               Biplot for continuous data based on gradient
                        descent methods
Games_Howell            Games-Howell post-hoc tests for Welch's one-way
                        analysis
GeneralizedProcrustes   Generalized Procrustes Analysis
GetBiplotScales         Calculates the scales for the variables on a
                        linear biplot
GetCCAScales            Calculates scales for plotting the
                        environmental variables in a Canonical
                        Correspondence Analysis
GowerProximities        Gower Dissimilarities for mixed types of data
GowerSimilarities       Gower Dissimilarities for mixed types of data
HJ.Biplot               HJ Biplot with added features.
Hermquad                Gauss-Hermite quadrature
HistogramPanel          Panel of histograms
InBox                   Checks if a point is inside a box.
InitialTransform        Initial transformation of data
Integer2Binary          Transforms an Integer Variable into a Binary
                        Variable
Kruskal.Wallis.Tests    Kruskal Wallis Tests
Levene.Tests            Levene Tests
LogFrequencyBiplot      Weighted Biplot for a table of frequencies
MDS                     Multidimensional Scaling
MGC                     Mixture Gaussian Clustering
Matrix2Proximities      Matrix to Proximities
MonotoneRegression      Weighted Isotonic Regression (Weighted Monotone
                        Regression)
MultBiplotR-package     Multivariate Analysis using Biplots
MultiTableStatistics    Statistics for multiple tables
MultiTableTransform     Initial Transformation of a multi table object
Multiquad               Multidimensional Gauss-Hermite quadrature
NIPALS.Biplot           Biplot using the NIPALS algorithm
NIPALSPCA               NIPALS algorithm for PCA
NiceNumber              Nice numbers: simple decimal numbers
NominalDistances        Distances among individuals with nominal
                        variables
NormalityTests          Normality tests
Numeric2Binary          Converts a numeric variable into a binary one
OrdLogBipEM             Alternated EM algorithm for Ordinal Logistic
                        Biplots
OrdVarBiplot            Plots an ordinal variable on the biplot
OrdVarCoordinates       Coordinates of an ordinal variable on the
                        biplot.
OrdinalBiplotExpectedValues
                        Expected Values for the Ordinal Logistic
                        Biplot.
OrdinalLogBiplotGDRecursive
                        Ordinal Logistic Biplot with a recursive
                        Gradien Descent Alternating algorithm.
OrdinalLogisticFit      Fits an ordinal logistic regression with ridge
                        penalization
OrthogonalizeScores     Orthogonalize a set of Scores calculated by
                        other procedure
PCA.Analysis            Classical PCA Biplot with added features.
PCA.Biplot              Classical PCA Biplot with added features.
PCA.Bootstrap           Principal Components Analysis with bootstrap
                        confidence intervals.
PLSR                    Partial Least Squares Regression
PLSR1Bin                Partial Least Squares Regression with Binary
                        Response
PLSRBin                 Partial Least Squares Regression with several
                        Binary Responses
PLSRBinFit              PLS binary regression.
PLSRfit                 Partial Least Squares Regression (PLSR)
PlotBiplotClusters      Plot clusters on a biplot.
PlotOrdinalResponses    Plot the response functions along the
                        directions of best fit.
PoliticalFigures        Political Figures in the USA
PolyBiplot              Logistic Biplot for ordinal data based on
                        polychoric correlations
PolychorMatrix          Calculates a matrix of polychoric correlations
                        among a set of ordinal variables
PrettyTicks             Calculates loose axis ticks and labels using
                        nice numbers
PrincipalCoordinates    Principal Coordinates Analysis
Protein                 Protein consumption data.
RAPD                    Sugar Cane Data
RemoveRowsWithNaNs      Remove rows that contains NaNs (missing data)
RidgeBinaryLogistic     Ridge Binary Logistic Regression for Binary
                        data
RidgeBinaryLogisticFit
                        Fits a binary logistic regression with ridge
                        penalization
RidgeMultinomialLogisticFit
                        Multinomial logistic regression with ridge
                        penalization
RidgeMultinomialLogisticRegression
                        Ridge Multinomial Logistic Regression
RidgeOrdinalLogistic    Ordinal logistic regression with ridge
                        penalization
SMACOF                  SMACOF
SSI                     Sustainability Society Index
SSI3w                   Sustainability Society Index (3w)
SSIEcon3w               Sustainability Society Index
SSIEnvir3w              Sustainability Society Index
SSIHuman3w              Sustainability Society Index
SeparateVarTypes        Separation of different types of variables into
                        a list
SimpleProcrustes        Simple Procrustes Analysis
Sparse.NIPALSPCA        Sparse version of the NIPALS algorithm for PCA.
SpidersEnv              Hunting spiders environmental data.
SpidersSp               Hunting Spiders Data
StatisBiplot            STATIS-ACT for multiple tables with common rows
                        and its associated Biplot
TetraDualStatis         Dual STATIS-ACT for binary data based on
                        Tetrachoric Correlations
Three2TwoWay            Converts a multitable list to a two way matrix
ThreeWay2FrontalSlices
                        Three to two way data
TransformIni            Initial transformation of a data matrix
Truncated.NIPALSPCA     Truncated version of the NIPALS algorithm for
                        PCA.
Unfolding               Multidimensional Unfolding
VarBiplot               Draws a variable on a biplot
WeightedPCoA            Weighted Principal Coordinates Analysis
anova.RidgeBinaryLogistic
                        Compares two binary logistic models
diagonal                Diagonal matrix from a vector
dlines                  Connects two sets of points by lines
ginv                    G inverse
logit                   Logit function
matrixsqrt              Matrix squared root
matrixsqrtinv           Inverse of the Matrix squared root
moth                    Moth data
ones                    Matrix of ones
plot.Binary.Logistic.Biplot
                        Plots the results of a Binary Logistic Biplot
plot.CA.sol             Plot the solution of a Coorespondence Analysis
plot.CCA.sol            Plots the solution of a Canonical
                        Correspondence Analysisis
plot.CVA                Plot of a Canonical Variate Analysis
plot.Canonical.Biplot   Plots a Canonical Biplot
plot.CanonicalDistanceAnalysis
                        Plots a Canonical Distance Analysis
plot.ContinuousBiplot   Plots a biplot for continuous data.
plot.External.Binary.Logistic.Biplot
                        Plots an External Logistic Biplot for binary
                        data
plot.MGC                Plot the results of Model-Based Gaussian
                        Clustering algorithms
plot.Ordinal.Logistic.Biplot
                        Plots an ordinal Logistic Biplot
plot.PCA.Analysis       Plots a Principal Component Analysis
plot.PCA.Bootstrap      Plots the Bootstrap information for Principal
                        Components Analysis (PCA)
plot.PCoABootstrap      Plots an object of class PCoABootstrap
plot.Principal.Coordinates
                        Plots an object of class Principal.Coordinates
plot.Procrustes         Plots an object of class "Procrustes"
plot.StatisBiplot       Plots a Statis Biplot Object
plot.TetraDualStatis    Plots an object of class "tetraDualStatis".
plot.Unfolding          Plots an Unfolding Representation
plot.ellipse            Plot a concentration ellipse.
plot.fraction           Plots a fraction of the data as a cluster
print.MGC               Prints the results of Model-Based Gaussian
                        Clustering algorithms
print.RidgeBinaryLogistic
                        prints an object of class RidgeBinaryLogistic
riano                   Ecological data from Riano (Spain)
scores.CCA.sol          Extract the scores of a CCA solution object
sigmoide                Logistic function
smoking                 Smoking habits
spiders                 Hunting Spiders Data
summary.CCA.sol         Summary of the solution of a CCA
summary.CVA             Summary of a Canonical Variate Analysis
summary.Canonical.Biplot
                        Summary of the solution of a Canonical Biplot
                        Analysis
summary.ContinuousBiplot
                        Summary of the solution of a Biplot for
                        Continuous Data
summary.MGC             Summary of Model-Based Gaussian Clustering
                        results
summary.PCA.Analysis    Summary of the results of a PCA.
summary.PCA.Bootstrap   Summary of a PCA.Bootstrap object
summary.PLSR            Summary of a PLSR object
summary.PLSR1Bin        Summary of PLSR with a Binary Response
summary.Principal.Coordinates
                        Summary of the results of a Principal
                        Coordinates Analysis
summary.RidgeBinaryLogistic
                        Summary of a Binary Logistic Regression with
                        Ridge Penalization
summary.TetraDualStatis
                        Summary of the results of TetraDualStatis
textsmart               Labels of a Scatter
wa                      Extracts the weighted averages of a CCA
                        solution
wcor                    Weighted correlations
weighted.quantile       Weighted quantiles
wine                    Wine data
zeros                   Matrix of zeros as in Matlab
