R: Risk Prediction on Trees

# Risk Prediction on Trees

## Documentation for package ‘Mangrove’ version 1.21

- DESCRIPTION file
- User guides, package vignettes and other documentation
- Package NEWS

## Help Pages

Mangrove-package | Mangrove: Risk prediction on trees
addPed | The MangroveTree class
applyBetas | The MangroveContPreds class
applyORs | The MangroveRiskPreds class
calcBetas | The MangroveContPreds class
calcORs | The MangroveRiskPreds class
ccped | Example data for the Mangrove vignette
contped | Example data for the Mangrove vignette
exampleBetas | Example data for the Mangrove vignette
exampleORs | Example data for the Mangrove vignette
famped | Example data for the Mangrove vignette
getPrevs | The MangroveTree class
getVarExp | Calculating liability-scale variance explained by genetic risk variants
getVarExpSim | Calculating liability-scale variance explained by genetic risk variants
initialiseTree | The MangroveTree class
Mangrove | Mangrove: Risk prediction on trees
MangroveBetas | The MangroveBetas class
MangroveContPreds | The MangroveContPreds class
MangroveExamples | Example data for the Mangrove vignette
MangroveORs | The MangroveORs class
MangrovePed | The MangrovePed class
MangroveRiskPreds | The MangroveRiskPreds class
MangroveSample | The MangroveSample class
MangroveTree | The MangroveTree class
plot.MangroveBetas | The MangroveBetas class
plot.MangroveContPreds | The MangroveContPreds class
plot.MangroveORs | The MangroveORs class
plot.MangrovePed | The MangrovePed class
plot.MangroveRiskPreds | The MangroveRiskPreds class
plot.MangroveSample | The MangroveSample class
plot.MangroveTree | The MangroveTree class
plotNaivePrev | Plotting expected
plotSampledPrev | Plotting expected
print.MangroveBetas | The MangroveBetas class
print.MangroveContPreds | The MangroveContPreds class
print.MangroveORs | The MangroveORs class
print.MangrovePed | The MangrovePed class
print.MangroveRiskPreds | The MangroveRiskPreds class
print.MangroveSample | The MangroveSample class
print.MangroveTree | The MangroveTree class
readBetas | The MangroveBetas class
readORs | The MangroveORs class
readPed | The MangrovePed class
summary.MangroveBetas | The MangroveBetas class
summary.MangroveContPreds | The MangroveContPreds class
summary.MangroveORs | The MangroveORs class
summary.MangrovePed | The MangrovePed class
summary.MangroveRiskPreds | The MangroveRiskPreds class
summary.MangroveSample | The MangroveSample class
summary.MangroveTree | The MangroveTree class