R: Multi-Layer Group-Lasso

# Multi-Layer Group-Lasso

## Documentation for package ‘MLGL’ version 1.0.1

- DESCRIPTION file
- Package NEWS

## Help Pages

MLGL-package | MLGL
bootstrapHclust | Hierarchical Clustering with distance matrix computed using bootstrap replicates
coef.cv.MLGL | Get coefficients from a 'cv.MLGL' object
coef.MLGL | Get coefficients from a 'MLGL' object
computeGroupSizeWeight | Compute the group size weight vector with an authorized maximal size
cv.MLGL | Multi-Layer Group-Lasso with cross V-fold validation
Ftest | F-test
fullProcess | Full process of MLGL
fullProcess.default | Full process of MLGL
fullProcess.formula | Full process of MLGL
hierarchicalFDR | Hierarchical testing with FDR control
hierarchicalFWER | Hierarchical testing with FWER control
HMT | Hierarchical Multiple Testing procedure
listToMatrix | Obtain a sparse matrix of the coefficients of the path
MLGL | Multi-Layer Group-Lasso
MLGL.default | Multi-Layer Group-Lasso
MLGL.formula | Multi-Layer Group-Lasso
overlapgglasso | Group-lasso with overlapping groups
partialFtest | Partial F-test
plot.cv.MLGL | Plot the cross-validation obtained from 'cv.MLGL' function
plot.fullProcess | Plot the path obtained from 'fullProcess' function
plot.HMT | Plot the path obtained from 'HMT' function
plot.MLGL | Plot the path obtained from 'MLGL' function
plot.stability.MLGL | Plot the stability path obtained from 'stability.MLGL' function
predict.cv.MLGL | Predict fitted values from a 'cv.MLGL' object
predict.MLGL | Predict fitted values from a 'MLGL' object
print.fullProcess | Print Values
print.HMT | Print Values
print.MLGL | Print Values
selFDR | Selection from hierarchical testing with FDR control
selFWER | Selection from hierarchical testing with FWER control
simuBlockGaussian | Simulate multivariate Gaussian samples with block diagonal variance matrix
stability.MLGL | Stability Selection for Multi-Layer Group-lasso
summary.fullProcess | Object Summaries
summary.HMT | Object Summaries
summary.MLGL | Object Summaries
uniqueGroupHclust | Find all unique groups in 'hclust' results