Ftest                   F-test
HMT                     Hierarchical Multiple Testing procedure
MLGL                    Multi-Layer Group-Lasso
MLGL-package            MLGL
bootstrapHclust         Hierarchical Clustering with distance matrix
                        computed using bootstrap replicates
coef.MLGL               Get coefficients from a 'MLGL' object
coef.cv.MLGL            Get coefficients from a 'cv.MLGL' object
computeGroupSizeWeight
                        Compute the group size weight vector with an
                        authorized maximal size
cv.MLGL                 Multi-Layer Group-Lasso with cross V-fold
                        validation
fullProcess             Full process of MLGL
hierarchicalFDR         Hierarchical testing with FDR control
hierarchicalFWER        Hierarchical testing with FWER control
listToMatrix            Obtain a sparse matrix of the coefficients of
                        the path
overlapgglasso          Group-lasso with overlapping groups
partialFtest            Partial F-test
plot.HMT                Plot the path obtained from 'HMT' function
plot.MLGL               Plot the path obtained from 'MLGL' function
plot.cv.MLGL            Plot the cross-validation obtained from
                        'cv.MLGL' function
plot.fullProcess        Plot the path obtained from 'fullProcess'
                        function
plot.stability.MLGL     Plot the stability path obtained from
                        'stability.MLGL' function
predict.MLGL            Predict fitted values from a 'MLGL' object
predict.cv.MLGL         Predict fitted values from a 'cv.MLGL' object
print.HMT               Print Values
print.MLGL              Print Values
print.fullProcess       Print Values
selFDR                  Selection from hierarchical testing with FDR
                        control
selFWER                 Selection from hierarchical testing with FWER
                        control
simuBlockGaussian       Simulate multivariate Gaussian samples with
                        block diagonal variance matrix
stability.MLGL          Stability Selection for Multi-Layer Group-lasso
summary.HMT             Object Summaries
summary.MLGL            Object Summaries
summary.fullProcess     Object Summaries
uniqueGroupHclust       Find all unique groups in 'hclust' results
