R: Multi-Modal Similarity Matrix Factorization for Integrative Multi-Omics Data Analysis

# Multi-Modal Similarity Matrix Factorization for Integrative Multi-Omics Data Analysis

## Documentation for package ‘M2SMF’ version 2.0

- DESCRIPTION file
- User guides, package vignettes and other documentation

## Help Pages

affinityMatrix | To calculate the similarity matrix
Cal_NMI | calculate the normalized mutual information.
cost | Calculate the cost
dist2bin | Calculate the agreement-based measurement
dist2chi | Calculate the chi-squared distance
dist2eu | Calculate the Euclidean distance
initialization | initialize the sub-matrix Ci into alpha*Li by SVD
initialize_WL | Initialize from the similairty matrix list
M2SMF | the main part for M2SMF and clustering result
new_modularity | Calculate the modularity
simu_data_gen | Generate simulated data
Standard_Normalization | Normalize the input matrix by column
update_alpha | the function to update alpha
update_L | the function to update Li, for i=1,2,...,N