Istep_Z                 I-step of LUCID
analyze_missing_pattern
                        Analyze missing data patterns in detail
boot_lucid              Inference of LUCID model based on bootstrap
                        resampling
check_and_stabilize_sigma
                        Check matrix condition and stabilize if needed
check_convergence       Check convergence with both absolute and
                        relative criteria
check_imputation_quality
                        Check quality of imputed data
check_na                Check missing patterns in omics data
estimate_lucid          Fit LUCID models with one or multiple omics
                        layers
fill_data               Impute missing data by optimizing the
                        likelihood function
gen_ci                  generate bootstrp ci (normal, basic and
                        percentile)
lucid                   Fit a lucid model for integrated analysis on
                        exposure, outcome and multi-omics data,
                        allowing for tuning
plot                    Visualize LUCID model through a Sankey diagram
predict_lucid           Predict Cluster Assignment and Outcome From a
                        Fitted LUCID Model
print.sumlucid_early    Print the output of LUCID in a nicer table
print.sumlucid_parallel
                        Print the output of LUCID in a nicer table
print.sumlucid_serial   Print the output of LUCID in a nicer table
safe_impute             Safe imputation for edge cases
safe_log_sum_exp        Safe log-sum-exp computation
safe_normalize          Safe probability normalization
safe_solve              Safe matrix inversion with stability checks
sim_data                A simulated dataset for LUCID
simulated_HELIX_data    A simulated HELIX dataset for LUCID
summarize_missing_stats
                        Summarize missing-data patterns from check_na
                        output
summary.lucid_parallel
                        Summarize results of the parallel LUCID model
summary.lucid_serial    Summarize results of the serial LUCID model
summary_lucid           Summarize results of the early LUCID model
tune_lucid              Wrapper for LUCID Model and Penalty Tuning
