Package: LDAcoop
Type: Package
Title: Analysis of Data from Limiting Dilution Assay (LDA) with or
        without Cellular Cooperation
Version: 0.1.2
Authors@R: c(
    person("Daniel", "Samaga", 
           email = "daniel.samaga@helmholtz-munich.de",
           role = c("cre","aut")),
    person("Nikko", "Brix", 
           role = "aut"),
    person("Benedek","Danko",
           role = "aut"),
    person("Kirsten", "Lauber", 
           role = "aut"),
    person("Horst", "Zitzelsberger", 
           role = "aut"))
Maintainer: Daniel Samaga <daniel.samaga@helmholtz-munich.de>
URL: https://github.com/ZytoHMGU/LDAcoop
BugReports: https://github.com/ZytoHMGU/LDAcoop/issues
Description: Cellular cooperation compromises the established method of
	calculating clonogenic activity from limiting dilution assay (LDA) data.
	This tool provides functions that enable robust analysis in presence or
	absence of cellular cooperation. The implemented method incorporates the
	same cooperativity module to model the non-linearity associated with
	cellular cooperation as known from the colony formation assay (Brix et al.
	(2021) <doi:10.1038/s41596-021-00615-0>: "Analysis of clonogenic growth in
	vitro." Nature protocols).
License: GPL-3
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.2.3
Depends: R (>= 3.5.0)
Imports: Hmisc
Suggests: knitr, rmarkdown, testthat (>= 3.0.0)
VignetteBuilder: knitr
Config/testthat/edition: 3
NeedsCompilation: no
Packaged: 2024-07-17 09:43:00 UTC; daniel.samaga
Author: Daniel Samaga [cre, aut],
  Nikko Brix [aut],
  Benedek Danko [aut],
  Kirsten Lauber [aut],
  Horst Zitzelsberger [aut]
Repository: CRAN
Date/Publication: 2024-07-17 10:00:02 UTC
Built: R 4.6.0; ; 2026-04-25 13:45:17 UTC; unix
