Y_CT                    Clonal tracking data from clinical trials
Y_RM                    Rhesus Macaque clonal tracking dataset
get.cdn                 Get the cell differentiation network from a
                        fitted Kalman Reaction Network.
get.fit                 Fit the state-space model to a clonal tracking
                        dataset
get.sMoments            Get the first two-order smoothing moments from
                        a fitted Kalman Reaction Network.
get.sMoments.avg        Get the clone-average of the first two-order
                        smoothing moments from a fitted Kalman Reaction
                        Network.
get.sim.trajectories    Simulate a clonal tracking dataset from a given
                        cell differentiation network.
nearestPD               Nearest Positive Definite Matrix
