R: Framework for Tick Population and Infection Modeling

# Framework for Tick Population and Infection Modeling

## Documentation for package ‘IxPopDyMod’ version 0.4.0

- DESCRIPTION file
- Package NEWS
- Package README

## Help Pages

annual_growth_rate | Calculate annual growth rate
config | Create a 'config' object
config_ex_1 | Simple model configuration example
config_ex_2 | Simple model configuration example using delays
constant_fun | Constant function
density_fun | Density dependent mortality
expo_fun | Exponential function
feed_fun | Probability of actively questing and then finding a host
find_n_feed | Probability of finding a host and successfully feeding on it
format.predictor_spec | Format a 'predictor_spec'
get_pred_from_table | Get a predictor from input data
growth_rate | Calculate multiplicative growth rate of population
host_example_config | Configuration for showing how we can modify host community data
infect_example_config | Configuration for showing infection dynamics
infect_fun | Probability that a feeding tick becomes engorged infected or uninfected
life_cycle | Create a 'life_cycle' from a collection of 'transition's
new_transition_function | Constructor for transition functions
ogden2005 | Configuration for Ixodes scapularis population dynamics model from Ogden et al. 2005
ogden_feed_fun | Probability of actively questing times constant host finding probability
parameters | Create a set of parameters
predictors | Create a table of 'predictors'
predictor_spec | Specify how a single predictor should be used
print.predictor_spec | Print a 'predictor_spec'
print.transition | Print a transition
run | Run the model
snow_cover_fun | Mortality as a function of whether there is a snow on the ground
temp_example_config | Configuration for showing how we can modify climate data
transition | Create a 'transition' object
winter_tick | Configuration for winter tick population dynamics model