R: Assessment of Individual Identity in Animal Signals

# Assessment of Individual Identity in Animal Signals

## Documentation for package ‘IDmeasurer’ version 1.0.0

- DESCRIPTION file
- User guides, package vignettes and other documentation
- Package NEWS
- Package README

## Help Pages

IDmeasurer-package | IDmeasurer: A package for calculation of individual identity metrics in animal signals.
ANmodulation | Little owl, _Athene noctua_ - frequency modulation
ANspec | Little owl, _Athene noctua_ - spectrum properties
calcDistT | Calculate total distance in given dataset
calcDistW | Calculate average within individual distance
calcDS | Calculates discrimination score (DS)
calcF | Calculate F-values for individual identity traits
calcHM | Calculate information capacity (HM)
calcHS | Calculate Beecher's information statistic (HS, variant = HSnpergroup)
calcHSngroups | Calculate Beecher's information statistic (HS, variant = HSngroups)
calcHSnpergroup | Calculate Beecher's information statistic (HS, variant = HSnpergroup)
calcHSntot | Calculate Beecher's information statistic (HS, variant = HSntot)
calcHSvarcomp | Calculate Beecher's information statistic (HS, variant = HSvarcomp)
calcMeanVec | Calculate the centroid of the individual identity traits
calcMI | Calculate Mutual information (MI)
calcPCA | Convert raw trait variables into principal components
calcPIC | Calculates potential of identity coding (PIC, variant=PICbetweentot)
calcPICbetweenmeans | Calculates potential of identity coding (PIC, variant=PICbetweenmeans)
calcPICbetweentot | Calculates potential of identity coding (PIC, variant=PICbetweentot)
CCformants | Corncrake, _Crex crex_ - formants
CCspec | Corncrake, _Crex crex_ - spectrum properties
convertDStoHS | Convert DS to HS
convertHStoDS | Convert HS to DS
GenerateMultivariate | Generate dataset with multiple individual identity traits
GenerateUnivariate | Generate dataset with a single individual identity trait
IDmeasurer | IDmeasurer: A package for calculation of individual identity metrics in animal signals.
LAhighweewoo | Yellow-breasted boubou, _Laniarius atroflavus_ - spectrum properties
SSgrunts | Domestic pig, _Sus scrofa domestica_ - piglet grunts