R: Inference and Estimation of Hidden Markov Models and Hidden Semi-Markov Models

# Inference and Estimation of Hidden Markov Models and Hidden Semi-Markov Models

## Documentation for package ‘HMMHSMM’ version 0.1.0

- DESCRIPTION file

## Help Pages

conditionalreturnsHMMgev | Plot Conditional Return Levels from GEV-HMM
conditionalreturnsHSMMgev | Plot Conditional Return Levels from GEV-HSMM
confintHMM | Bootstrap Confidence Intervals for Hidden Markov Models
confintHSMM | Bootstrap Confidence Intervals for Hidden Semi-Markov Models
daily_maxima | Daily maxima of geomagnetic rate-of-change data from Eskdalemuir Magnetic Observatory
exceedanceplotHMMgev | Plot Exceedance Probabilities from GEV-HMM
exceedanceplotHSMMgev | Plot Exceedance Probabilities from GEV-HSMM
findmleHMM | Maximum Likelihood Estimation for Hidden Markov Models
findmleHMMnostarting | Multiple Initialization Maximum Likelihood Estimation for Hidden Markov Models
findmleHSMM | Maximum Likelihood Estimation for Hidden Semi-Markov Models
findmleHSMMnostarting | Fit Hidden Semi-Markov Model (HSMM) Without User-Provided Starting Values
generateHMM | Generate Data from a Hidden Markov Model
generateHSMM | Generate Data from a Hidden Semi-Markov Model
globaldecodeHMM | Global Decoding for Hidden Markov Models
globaldecodeHSMM | Global Decoding of Hidden Semi-Markov Models
HMMVarianceMatrix | Variance-Covariance Matrix for Hidden Markov Models
HSMMVarianceMatrix | Variance-Covariance Matrix for Hidden Semi-Markov Models
IC | Calculate Information Criteria for HMM/HSMM Models
localdecodeHMM | Local Decoding for Hidden Markov Models
localdecodeHSMM | Local Decoding for Hidden Semi-Markov Models
plotHMMParameters | Plot Hidden Markov Model Parameters Over Time
plotHSMMParameters | Plot Hidden Semi-Markov Model Parameters Over Time
residualsHMM | Ordinary Residuals for Hidden Markov Models
residualsHSMM | Ordinary Residuals for Hidden Semi-Markov Models
weekly_maxima | Weekly maxima of geomagnetic rate-of-change data from Eskdalemuir Magnetic Observatory