R: Modeling and Inferring Gene Networks

# Modeling and Inferring Gene Networks

## Documentation for package ‘GeneNet’ version 1.2.17

- DESCRIPTION file
- User guides, package vignettes and other documentation
- Package NEWS

## Help Pages

GeneNet-package | The GeneNet package
arth800 | Time Series Expression Data for 800 Arabidopsis Thaliana Genes
arth800.descr | Time Series Expression Data for 800 Arabidopsis Thaliana Genes
arth800.expr | Time Series Expression Data for 800 Arabidopsis Thaliana Genes
arth800.mexpr | Time Series Expression Data for 800 Arabidopsis Thaliana Genes
arth800.name | Time Series Expression Data for 800 Arabidopsis Thaliana Genes
arth800.probe | Time Series Expression Data for 800 Arabidopsis Thaliana Genes
arth800.symbol | Time Series Expression Data for 800 Arabidopsis Thaliana Genes
cor0.test | Test of Vanishing (Partial) Correlation
ecoli | Microarray Time Series Data for 102 E. Coli Genes Genes
edge.info | Graphical Gaussian Models: Plotting the Network
extract.network | Graphical Gaussian Models: Assess Significance of Edges (and Directions)
ggm.estimate.pcor | Graphical Gaussian Models: Small Sample Estimation of Partial Correlation
ggm.simulate.data | Graphical Gaussian Models: Simulation of Data
ggm.simulate.pcor | Graphical Gaussian Models: Simulation of Networks
hotelling.transform | Variance-Stabilizing Transformations of the Correlation Coefficient
kappa2n | Relationship Between Sample Size and the Degree of Freedom of Correlation Distribution
n2kappa | Relationship Between Sample Size and the Degree of Freedom of Correlation Distribution
network.make.dot | Graphical Gaussian Models: Plotting the Network
network.make.graph | Graphical Gaussian Models: Plotting the Network
network.test.edges | Graphical Gaussian Models: Assess Significance of Edges (and Directions)
node.degree | Graphical Gaussian Models: Plotting the Network
num.nodes | Graphical Gaussian Models: Plotting the Network
z.transform | Variance-Stabilizing Transformations of the Correlation Coefficient