Package: GARCOM
Type: Package
Title: Gene and Region Counting of Mutations ("GARCOM")
Version: 1.2.2
Authors@R: c(person("Sanjeev","Sariya",
           role = c("aut", "cre","cph"),email = "sanjeevsariya@gmail.com"),person("Giuseppe","Tosto", role =c("aut","cph")))
Description: Gene and Region Counting of Mutations (GARCOM) package computes mutation (or alleles) counts per gene per individuals based on gene annotation or genomic base pair boundaries. It comes with features to accept data formats in plink(.raw) and VCF. It provides users flexibility to extract and filter individuals, mutations and genes of interest.
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.1.1
Imports: data.table (>= 1.12.8), stats, vcfR (>= 1.12.0)
Suggests: testthat
Depends: R (>= 3.5.0)
NeedsCompilation: no
Packaged: 2022-12-23 11:37:43 UTC; sanjeevsariya
Author: Sanjeev Sariya [aut, cre, cph],
  Giuseppe Tosto [aut, cph]
Maintainer: Sanjeev Sariya <sanjeevsariya@gmail.com>
Repository: CRAN
Date/Publication: 2022-12-23 11:50:02 UTC
Built: R 4.6.0; ; 2026-04-26 13:09:35 UTC; unix
