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@inproceedings{sharma2020COPTYP,
	address = {New York, NY, USA},
	articleno = {14},
	author = {Sharma, Ruby and Luo, Xuye and Kumar, Sajal and Song, Mingzhou},
	booktitle = {Proceedings of the 11th ACM International Conference on Bioinformatics, Computational Biology and Health Informatics},
	doi = {10.1145/3388440.3412485},
	isbn = {9781450379649},
	keywords = {Planktonic microbial community, Metatranscriptome, Oceanic ecosystem, Co-expression network, First-order differential pattern},
	location = {Virtual Event, USA},
	numpages = {10},
	publisher = {Association for Computing Machinery},
	series = {BCB '20},
	title = {Three Co-Expression Pattern Types across Microbial Transcriptional Networks of Plankton in Two Oceanic Waters},
	url = {https://doi.org/10.1145/3388440.3412485},
	year = {2020},
	Bdsk-Url-1 = {https://doi.org/10.1145/3388440.3412485}}

@article{song2014hunting,
	author = {Mingzhou Song and Yang Zhang and Alexia J Katzaroff and Bruce A Edgar and Laura Buttitta},
	doi = {10.1093/nar/gku086},
	journal = {Nucleic Acids Research},
	number = {7},
	pages = {e57},
	title = {Hunting complex differential gene interaction patterns across molecular contexts},
	volume = {42},
	year = {2014},
	Bdsk-Url-1 = {https://doi.org/10.1093/nar/gku086}}

@article{zhang2015chinet,
	author = {Yang Zhang and Z Lewis Liu and Mingzhou Song},
	date-modified = {2021-01-02 14:40:26 -0700},
	doi = {10.1093/nar/gkv358},
	journal = {Nucleic Acids Research},
	number = {9},
	pages = {4393--4407},
	title = {{ChiNet} uncovers rewired transcription subnetworks in tolerant yeast for advanced biofuels conversion},
	volume = {43},
	year = {2015},
	Bdsk-Url-1 = {https://doi.org/10.1093/nar/gkv358}}

@article{sharma2017simulating,
	author = {Ruby Sharma and Sajal Kumar and Hua Zhong and Mingzhou Song},
	doi = {10.32614/RJ-2017-053},
	journal = {The R Journal},
	number = {2},
	pages = {366--377},
	title = {Simulating noisy, nonparametric, and multivariate discrete patterns},
	volume = {9},
	year = {2017},
	Bdsk-Url-1 = {https://doi.org/10.32614/RJ-2017-053}}

@book{zar2009biostatistical,
	address = {New Jersey},
	author = {Jerrold H. Zar},
	edition = {5th},
	publisher = {Prentice Hall},
	title = {Biostatistical Analysis},
	year = {2009}}

@book{george2005statistics,
	address = {New York},
	author = {George, EP and Hunter, J Stuart and Hunter, William Gordon and Bins, Roma and Kirlin IV, Kay and Carroll, Destiny},
	publisher = {Wiley},
	title = {Statistics for Experimenters: Design, Innovation, and Discovery},
	year = {2005}}

@article{ruby2021/BIOINF-2020-0795,
	author = {Sharma, Ruby and Kumar, Sajal and Song, Mingzhou},
	date-modified = {2021-04-09 09:21:46 -0600},
	doi = {10.1093/bioinformatics/btab240},
	journal = {Bioinformatics},
	title = {{Fundamental gene network rewiring at the second order within and across mammalian systems}},
	year = {2021}}