CRABS-package           CRABS: Congruent Rate Analyses in Birth-death
                        Scenarios
congruent.models        Create a set of congruent models
crabs.loglikelihood     Compute likelihood
create.model            Computes the congruent class, i.e., the pulled
                        rates.
full.plot.regularity.thresholds
                        Plots the rate functions after filtering them
                        according to a given penalty and predefined
                        thresholds.
joint.congruent.models
                        Create a set of congruent models
model2df                model2df
plot.CRABS              Plots the rate functions including the pulled
                        rates.
plot.CRABSset           Plots the rate functions
primates                Primates phylogenetic tree
primates_ebd            RevBayes Primates birth-death model
primates_ebd_log        Primates birth-death model
primates_ebd_tess       TESS Primates birth-death model
primates_ebd_treepar    TreePar Primates birth-death model
print.CRABS             Print method for CRABS object
print.CRABSposterior    Title
print.CRABSset          Print method for CRABSset object
print.CRABSsets         print.CRABSsets
read.RevBayes           read RevBayes log file
sample.basic.models     Samples simple increase/decrease models through
                        time with noise.
sample.basic.models.joint
                        Jointly samples speciation and extinction
                        trajectories through time, with noise.
sample.congruence.class
                        Stochastic exploration of congruent models.
sample.congruence.class.posterior
                        Stochastic exploration of congruent models for
                        all samples in the posterior
sample.rates            Sample custom functions through time.
summarize.posterior     Summarize trends in the posterior
summarize.trends        Summarize trends in the congruence class
