R: Safety Assessment in Agricultural Field Trials

# Safety Assessment in Agricultural Field Trials

## Documentation for package ‘BSagri’ version 0.1-10

- DESCRIPTION file

## Help Pages

allignment | Allignment according to one factor
BOOTSimpsonD | Simultaneous confidence intervals for Simpson indices
BOOTSimpsonR | Simultaneous confidence intervals for Simpson indices
Brachycera | Eklektor counts of Brachycera
c2compnames | Define row names of a contrast matrix, depending on its column names
Cica1 | Catches of Planthoppers and Leafhoppers
Cica2 | Catches of Planthoppers and Leafhoppers
CIGLM | Wrapper to compute confidence intervals from glms
CInp | Construct local confidence intervals from joint empirical distribution.
CInp.bugs | Construct local confidence intervals from joint empirical distribution.
CInp.CCDiff | Construct local confidence intervals from joint empirical distribution.
CInp.CCRatio | Construct local confidence intervals from joint empirical distribution.
CInp.default | Construct local confidence intervals from joint empirical distribution.
CountRep | Simulated count data incl. repeated measurements
Decomp | A simulated data set
Diptera | Soil eklektor data for some families of Diptera
ExNBCov | Simulated example data, drawn from a Negative Binomial Distribution
ExPCov | Simulated example data following a Poisson distribution
fakeln | A simulated data set of lognormal data
Feeding | Pupation and Hatching rate in a feeding experiment with four varieties
IAcontrasts | Interaction contrasts for 2-factorial designs
IAcontrastsCMAT | Interaction contrasts for a two-factorial design
Lepi | Insect counts of 12 Species
MM1 | Simulated data set for a simple mixed model
MMPois | Simulated data for a simple mixed model with Poisson response
MMPoisRep | Simulated data for a simple mixed model with Poisson response
Nematocera | Trap counts of Nematocera
plotCI.simplesimint | Plot confidence intervals calculated by pairwiseCI
plotCI.UnlogCI | Plot confidence intervals calculated by pairwiseCI
SCSnp | Simultaneous confidence sets from empirical joint distribution.
SCSnp.bugs | Simultaneous confidence sets from empirical joint distribution.
SCSnp.CCDiff | Simultaneous confidence sets from empirical joint distribution.
SCSnp.CCRatio | Simultaneous confidence sets from empirical joint distribution.
SCSnp.default | Simultaneous confidence sets from empirical joint distribution.
simplesimint | Simultaneous confidence intervals from raw estimates
summary.simplesimint | Detailed print out for simplesimint objects
UnlogCI | Transform confidence intervals from glm fits.
UnlogCI.glht | Transform confidence intervals from glm fits.
vcov.gamlss | Extract variance covariance matrix from objects of class gamlss
vcov.geeglm | Extract variance covariance matrix from objects of class geeglm