.fix_all_results        fix_all_results verifies that the results table
                        has the correct format and p-values
.get_3n_context_of_mutations
                        This function finds the tri-nucleotide context
                        of mutations
.get_obs_exp            Calculates the number of expected mutations
                        based
.get_signf_results      Returns significant results
.make_mut_signatures    Makes mutational signatures
.split_coord_fragments_in_BED
                        Splits a BED12 file into separate regions
ADWGS_test              ADWGS_test executes the statistical test for
                        ActiveDriverWGS
ActiveDriverWGS         ActiveDriverWGS is a driver discovery tool for
                        simple somatic mutations in cancer whole
                        genomes
cancer_gene_sites       post-translational modification sites found in
                        cancer genes
cancer_genes            cancer_genes
cll_mutations           CLL mutations
format_muts             This function filters hypermutated samples and
                        returns the formatted mutations with the
                        appropriate trinucleotide context
prepare_elements_from_BED12
                        Prepares element coords from a BED12 file
prepare_elements_from_BED4
                        Prepares element coords from a BED4 file
