R: Statistical Tools for Immune Correlates Analysis of Vaccine Clinical Trial Data

# Statistical Tools for Immune Correlates Analysis of Vaccine Clinical Trial Data

## Documentation for package ‘vaccine’ version 1.3.1

- DESCRIPTION file
- User guides, package vignettes and other documentation
- Package NEWS
- Package README

## Help Pages

as_table | Create table of estimates
diagnostics | Run diagnostics
est_ce | Estimate controlled effect curves
est_med | Estimate mediation effects
est_overall | Estimate overall risk and vaccine efficacy
hvtn505 | HVTN 505 Dataset
load_data | Load and format data object
params_ce_cox | Set parameters controlling Cox model estimation of controlled effect curves
params_ce_np | Set parameters controlling nonparametric estimation of controlled effect curves
params_med_np | Set parameters controlling nonparametric estimation of mediation effects
plot_ce | Plotting controlled effect curves
summary_stats | Calculate summary statistics
trim | Trim data for plotting/reporting