JSON_sample             DiMA (v5.0.9) JSON Output File
concat_conserved_kmer   k-mer sequences concatenation
extract_from_GISAID     Extract metadata via fasta file from GISAID
extract_from_NCBI       Extract metadata via fasta file from ncbi
json2csv                JSON2CSV
match_region_to_target
                        Map data region to ggplot2 region
metadata                Metadata Input Sample
metadata_extraction     Metadata Extraction from NCBI/GISAID
                        (EpiFlu/EpiCoV/EpiPox/EpiArbo) FASTA file
plot_conservation_level
                        Conservation Levels Distribution Plot
plot_correlation        Entropy and total variant incidence correlation
                        plot
plot_dynamics_protein   Dynamics of Diversity Motifs (Protein) Plot
plot_dynamics_proteome
                        Dynamics of Diversity Motifs (Proteome) Plot
plot_entropy            Entropy plot
plot_time               Time Distribution of Sequences Plot
plot_world_map          Geographical Distribution of Sequences Plot
protein_2hosts          DiMA (v5.0.9) JSON converted-CSV Output Sample
                        2
proteins_1host          DiMA (v5.0.9) JSON converted-CSV Output Sample
                        1
