R: Time Series with Matrix Profile

# Time Series with Matrix Profile

## Documentation for package ‘tsmp’ version 0.4.16

- DESCRIPTION file
- User guides, package vignettes and other documentation
- Package NEWS
- Package README

## Help Pages

analyze | Runs an appropriate workflow based on the parameters passed in.
as.arccount | Convert a TSMP object into another if possible
as.chain | Convert a TSMP object into another if possible
as.discord | Convert a TSMP object into another if possible
as.fluss | Convert a TSMP object into another if possible
as.matrixprofile | Convert a TSMP object into another if possible
as.motif | Convert a TSMP object into another if possible
as.multimatrixprofile | Convert a TSMP object into another if possible
as.multimotif | Convert a TSMP object into another if possible
as.pmp | Convert a TSMP object into another if possible
as.salient | Convert a TSMP object into another if possible
as.valmod | Convert a TSMP object into another if possible
av_apply | Corrects the matrix profile using an annotation vector
av_complexity | Computes the annotation vector that favors complexity
av_hardlimit_artifact | Computes the annotation vector that suppresses hard-limited artifacts
av_motion_artifact | Computes the annotation vector that suppresses motion artifacts
av_stop_word | Computes the annotation vector that suppresses stop-word motifs
av_zerocrossing | Computes the annotation vector that favors number of zero crossing
compute | Computes the Matrix Profile or Pan-Matrix Profile
discords | Search for Discord
dist_profile | Calculates the distance profile using MASS algorithms
fast_avg_sd | Fast implementation of moving average and moving standard deviation
fast_movavg | Fast implementation of moving average
fast_movsd | Fast implementation of moving standard deviation
find_chains | Find Time Series Chains
find_discord | Search for Discord
find_discord.MatrixProfile | Search for Discord
find_discord.PMP | Search for Discord
find_motif | Search for Motifs
find_motif.MatrixProfile | Search for Motifs
find_motif.MultiMatrixProfile | Search for Motifs
find_motif.PMP | Search for Motifs
find_snippet | Time Series Snippets: A New Primitive for Time Series Data Mining
floss | Fast Low-cost Online Semantic Segmentation (FLOSS)
floss_cac | FLOSS - Corrected Arc Counts
floss_extract | FLOSS - Extract Segments
fluss | Fast Low-cost Unipotent Semantic Segmentation (FLUSS)
fluss_cac | FLUSS - Corrected Arc Counts
fluss_extract | FLUSS - Extract Segments
fluss_score | FLUSS - Prediction score calculation
get_data | Get the data included in a TSMP object, if any.
mass_v3 | Calculates the distance profile using MASS_V3 algorithm
min_mp_idx | Get index of the minimum value from a matrix profile and its nearest neighbor
motifs | Search for Motifs
motifs_discords_small | Just a synthetic dataset for testing
mpdist | MPdist - Distance between Time Series using Matrix Profile
mpx | Fast implementation of MP and MPI for internal purposes, without FFT
mp_fluss_data | Original data used in the FLUSS paper
mp_gait_data | Original data used in the Time Series Chain demo
mp_meat_data | Original data used in the Salient Subsequences demo
mp_test_data | Original data used in the STDS demo
mp_toy_data | Original data used in the mSTAMP demo
mstomp | Multivariate STOMP algorithm Parallel version
mstomp_par | Multivariate STOMP algorithm Parallel version
plot | Plot a TSMP object
plot.ArcCount | Plot a TSMP object
plot.Chain | Plot a TSMP object
plot.Discord | Plot a TSMP object
plot.Floss | Plot a TSMP object
plot.Fluss | Plot a TSMP object
plot.MatrixProfile | Plot a TSMP object
plot.Motif | Plot a TSMP object
plot.MultiMatrixProfile | Plot a TSMP object
plot.MultiMotif | Plot a TSMP object
plot.PMP | Plot a TSMP object
plot.Salient | Plot a TSMP object
plot.SimpleMatrixProfile | Plot a TSMP object
plot.Snippet | Plot a TSMP object
plot.Valmod | Plot a TSMP object
plot_arcs | Plot arcs between indexes of a Profile Index
pmp | Pan-Matrix Profile
pmp_upper_bound | Pan Matrix Profile upper bound
read | Read TSMP object from JSON file.
remove_class | Remove a 'TSMP' class from an object
salient_mds | Convert salient sequences into MDS space
salient_score | Computes the F-Score of salient algorithm.
salient_subsequences | Framework for retrieve salient subsequences from a dataset
scrimp | Anytime univariate SCRIMP++ algorithm
sdts_predict | Framework for Scalable Dictionary learning for Time Series (SDTS) prediction function
sdts_score | Computes the F-Score of a SDTS prediction
sdts_train | Framework for Scalable Dictionary learning for Time Series (SDTS) training function
set_data | Set/changes the data included in TSMP object.
simple_fast | Compute the join similarity for Sound data
stamp | Anytime univariate STAMP algorithm Parallel version
stamp_par | Anytime univariate STAMP algorithm Parallel version
stomp | Univariate STOMP algorithm
stompi_update | Real-time STOMP algorithm
stomp_par | Univariate STOMP algorithm
tsmp | Computes the Matrix Profile and Profile Index
valmod | Variable Length Motif Discovery
visualize | Plots an object generated from one of the algorithms. In some cases multiple plots will be generated
write | Write a TSMP object to JSON file.
write.MatrixProfile | Write a TSMP object to JSON file.
write.PMP | Write a TSMP object to JSON file.