Package: treediff
Title: Testing Differences Between Families of Trees
Version: 0.2.2
Date: 2026-01-30
Authors@R: 
    c(person("Nathalie", "Vialaneix", , "nathalie.vialaneix@inrae.fr", 
             role = c("aut", "cre"), 
             comment = c(ORCID = "0000-0003-1156-0639")),
      person("Gwendaelle", "Cardenas", , , role = "aut"),
      person("Marie", "Chavent", , "marie.chavent@u-bordeaux.fr", role = "aut", comment = c(ORCID = "0000-0001-6774-597X")),
      person("Sylvain", "Foissac", , "sylvain.foissac@inrae.fr", role = "aut", comment = c(ORCID = "0000-0002-2631-5356")),
      person("Pierre", "Neuvial", , "pierre.neuvial@math.univ-toulouse.fr", 
             role = "aut", comment = c(ORCID = "0000-0003-3584-9998")),
      person("Nathanael", "Randriamihamison", , , role = "aut"))
Description: Perform test to detect differences in structure between families of
             trees. The method is based on cophenetic distances and aggregated
             Student's tests.
Depends: R (>= 4.0.0)
Imports: adjclust, BiocGenerics, csaw, data.table, dplyr,
        InteractionSet, limma, methods, stats, SummarizedExperiment,
        reshape2, testthat, rlang, HiCDOC, purrr
License: GPL (>= 3)
Encoding: UTF-8
RoxygenNote: 7.2.3
Suggests: knitr, rmarkdown
URL: https://scales.pages-forge.inrae.fr/treediff,
        https://forge.inrae.fr/scales/treediff
BugReports: https://forge.inrae.fr/scales/treediff/-/issues
NeedsCompilation: no
Packaged: 2026-01-30 16:09:37 UTC; nathalie
Author: Nathalie Vialaneix [aut, cre] (ORCID:
    <https://orcid.org/0000-0003-1156-0639>),
  Gwendaelle Cardenas [aut],
  Marie Chavent [aut] (ORCID: <https://orcid.org/0000-0001-6774-597X>),
  Sylvain Foissac [aut] (ORCID: <https://orcid.org/0000-0002-2631-5356>),
  Pierre Neuvial [aut] (ORCID: <https://orcid.org/0000-0003-3584-9998>),
  Nathanael Randriamihamison [aut]
Maintainer: Nathalie Vialaneix <nathalie.vialaneix@inrae.fr>
Repository: CRAN
Date/Publication: 2026-01-30 18:40:02 UTC
Built: R 4.6.0; ; 2026-04-29 09:05:45 UTC; unix
