R: Gene Set Analysis Exploiting Pathway Topology

# Gene Set Analysis Exploiting Pathway Topology

## Documentation for package ‘topologyGSA’ version 1.5.0

- DESCRIPTION file

## Help Pages

clique.mean.test | Comparison of all the cliques of a pathway.
clique.var.test | Testing the concentration matrices of all cliques of a pathway.
dag_bcell | DAG representation of the B cell receptor signaling pathway
pathway.mean.test | Testing the means of a pathway.
pathway.var.test | Testing the concentration matrices of a pathway.
print.clique.mean.test | Print results of statistical tests.
print.clique.var.test | Print results of statistical tests.
print.pathway.mean.test | Print results of statistical tests.
print.pathway.var.test | Print results of statistical tests.
render.significant.cliques | Graphical display of the significant cliques
y1 | Gene expression signatures in acute lymphocytic leukemia for BCR signaling pathway
y2 | Gene expression signatures in acute lymphocytic leukemia for BCR signaling pathway