calc_icat               Calculate ICAT (Independent Component Analysis
                        Trace) Index for TLS
detect_TLS              Detect Tertiary Lymphoid Structures using a
                        KNN-density approach
detect_tic              Detect T-cell Immune Clusters (TIC) on the
                        Tissue
plot_TLS                Plot Spatial Map of TLS and T-cell Clusters
scan_clustering         Scan Tissue for Local Immune Cell Clustering
                        (Ripley's L Heatmap)
summarize_TLS           Summarize Detected TLS Across Samples
tlsR-package            tlsR: Detection and Spatial Analysis of
                        Tertiary Lymphoid Structures
toy_ldata               Toy Multiplexed Imaging Data
