# Generated by roxygen2: do not edit by hand

export(allauc)
export(attenuation)
export(averageandfilterexprs)
export(blacklisthighmap)
export(checkexptab)
export(countna)
export(createtablescores)
export(genesECDF)
export(kneeallconds)
export(kneeid)
export(makewindows)
export(meandifference)
export(plotauc)
export(plotecdf)
export(plothistoknee)
export(plotmetagenes)
export(plotmulti)
export(preprocessing)
export(retrieveanno)
export(retrievechrom)
export(showallcomp)
export(tepr)
export(teprmulti)
export(universegroup)
importFrom(GenomeInfoDb,seqlengths)
importFrom(GenomeInfoDb,seqnames)
importFrom(MASS,kde2d)
importFrom(dplyr,across)
importFrom(dplyr,arrange)
importFrom(dplyr,bind_rows)
importFrom(dplyr,contains)
importFrom(dplyr,distinct)
importFrom(dplyr,filter)
importFrom(dplyr,full_join)
importFrom(dplyr,group_by)
importFrom(dplyr,left_join)
importFrom(dplyr,mutate)
importFrom(dplyr,pull)
importFrom(dplyr,relocate)
importFrom(dplyr,select)
importFrom(dplyr,slice_min)
importFrom(dplyr,summarise)
importFrom(dplyr,summarize)
importFrom(ggplot2,aes)
importFrom(ggplot2,coord_fixed)
importFrom(ggplot2,geom_area)
importFrom(ggplot2,geom_density_2d)
importFrom(ggplot2,geom_histogram)
importFrom(ggplot2,geom_line)
importFrom(ggplot2,geom_point)
importFrom(ggplot2,geom_vline)
importFrom(ggplot2,ggplot)
importFrom(ggplot2,ggsave)
importFrom(ggplot2,labs)
importFrom(ggplot2,scale_color_manual)
importFrom(ggplot2,scale_fill_manual)
importFrom(ggplot2,sec_axis)
importFrom(ggplot2,theme)
importFrom(ggplot2,theme_bw)
importFrom(ggplot2,theme_classic)
importFrom(ggplot2,xlab)
importFrom(ggplot2,xlim)
importFrom(ggplot2,ylim)
importFrom(ggrepel,geom_label_repel)
importFrom(magrittr,"%>%")
importFrom(matrixStats,rowDiffs)
importFrom(methods,is)
importFrom(parallel,mclapply)
importFrom(purrr,reduce)
importFrom(rlang,":=")
importFrom(rlang,.data)
importFrom(rlang,sym)
importFrom(rtracklayer,SeqinfoForUCSCGenome)
importFrom(rtracklayer,import.bedGraph)
importFrom(stats,ecdf)
importFrom(stats,ks.test)
importFrom(stats,na.omit)
importFrom(stats,p.adjust)
importFrom(tibble,add_column)
importFrom(tibble,as_tibble)
importFrom(tibble,tibble)
importFrom(tidyr,fill)
importFrom(tidyr,pivot_longer)
importFrom(tidyr,pivot_wider)
importFrom(tidyselect,all_of)
importFrom(tidyselect,contains)
importFrom(utils,combn)
importFrom(utils,read.csv)
importFrom(utils,read.delim)
importFrom(utils,write.table)
importFrom(valr,bed_intersect)
