A                       Arcs of a directed graph
A.mult                  Raise an adjacency matrix to some power
AIMS.node.coords        Nodal coordinates for graphs in the AIMS
                        project
I.D                     Generalized DAG indices
ICSL                    Integral connectivity scale length (ICSL)
R.bounds                Bounds for the correlation of two (or more)
                        Benrnoulli random variables
STIC.RFimpute           A wrapper for missForest for random forest STIC
                        imputation
arc.pa.from.nodes       Obtain arc stream activity outcomes based on
                        bounding nodes
assort                  Assortativity
bern.length             Botter and Durighetto Bernoulli stream length
beta.posterior          Posterior Beta and Inverse-beta summaries
biv.bern                Bivariate Bernoulli Distribution
dc_arc_pres_abs         Stream segment presence absence data for Dry
                        Cr. Idaho
dc_lengths              Lengths of Dry Creek stream (arc) segments
dc_node_pres_abs        Stream node presence absence data for Dry Cr.
                        Idaho
degree.dists            Potential degree distributions
delete.arcs.pa          Delete arcs based on presence absence data
delete.nodes.pa         Delete nodes based on presence absence data
dinvbeta                Inverse Beta Distribution
efficiency.matrix       Local and global efficiency
get.AIMS.data           Loads AIMS dataset associated with a particular
                        AIMS graph
gj_coords16             Coordinates of nodes at Gibson Jack Creek,
                        Idaho for a 2016 survey
gj_lengths              Lengths of Gibson Jack stream (arc) segments
gj_node_pres_abs        Stream node presence absence data for Gibson
                        Jack Idaho
gj_node_pres_abs16      Stream node presence absence data for Gibson
                        Jack Cr. Idaho, for a 2016 survey
global.summary          Global Summary
harary                  Harary Index
imp.closeness           Improved Closeness Centrality
isle                    Detects and defines islands in a streamDAG
jd_lengths              Lengths of Johnson Draw stream (arc) segments
jd_node_pres_abs        Stream node presence absence data for Johnson
                        Draw Idaho
kon_coords              Coordinates of nodes in the Konza Praire
                        dataset
kon_lengths             Lengths of Murphy Cr. stream (arc) segments
local.summary           local (nodal) summaries of a DAG
mur_arc_pres_abs        Stream segment presence absence data for Murphy
                        Cr. Idaho
mur_coords              Coordinates of nodes at Murphy Ck. Idaho
mur_lengths             Lengths of Murphy Cr. stream (arc) segments
mur_node_pres_abs       Stream node presence absence data for Murphy
                        Cr. Idaho
mur_seasons_arc_pa      Simulated seasonal arc presence absence data
                        for Murphy Cr
n.sources               Identify source and sink nodes
path.lengths.sink       Path Lengths
path.visibility         Path Visibilities
plot_degree.dist        Plot degree distributions
size.intact.to.arc      Size of the intact network above an arc
size.intact.to.sink     Size of intact network that feeds into the sink
                        or a particular node
spath.lengths           Shortest path lengths and number of paths
spatial.plot            Spatial plot of an igraph object or stream
                        shapefile
stream.order            Strahler or Shreve stream order of a stream DAG
streamDAGs              Stream DAG datasets
vector_segments         Functions for overlaying networks on shapefiles
