Type: Package
Package: snpAIMeR
Title: Assess the Diagnostic Power of Genomic Marker Combinations
Version: 2.1.1
Authors@R: c(
    person("Kim", "Vertacnik", , "kim.vertacnik@mailbox.org", role = c("cre", "aut"),
           comment = c(ORCID = "0009-0006-7097-5091")),
    person("Oksana", "Vernygora", role = "aut",
           comment = c(ORCID = "0000-0001-6444-3888")),
    person("Julian", "Dupuis", role = "aut",
           comment = c(ORCID = "0000-0002-6989-9179"))
  )
Description: Population genetics package for designing diagnostic panels. 
    Candidate markers, marker combinations, and different panel sizes are 
    assessed for how well they can predict the source population of known 
    samples. Requires a genotype file of candidate markers in STRUCTURE format. 
    Methods for population cross-validation are described in Jombart (2008) 
    <doi:10.1093/bioinformatics/btn129>.
License: MIT + file LICENSE
Contact: Kim Vertacnik <kim.vertacnik@mailbox.org> or Julian Dupuis
        <julian.dupuis@uky.edu>
URL: https://github.com/OksanaVe/snpAIMeR
Depends: R (>= 2.10)
Imports: adegenet, doParallel, dplyr, forcats, foreach, ggplot2,
        graphics, magrittr, parallel, readr, tidyr, utils, withr, yaml
Suggests: testthat (>= 3.0.0)
Config/testthat/edition: 3
Encoding: UTF-8
RoxygenNote: 7.3.1
NeedsCompilation: no
Packaged: 2024-02-20 20:01:29 UTC; kim
Author: Kim Vertacnik [cre, aut] (<https://orcid.org/0009-0006-7097-5091>),
  Oksana Vernygora [aut] (<https://orcid.org/0000-0001-6444-3888>),
  Julian Dupuis [aut] (<https://orcid.org/0000-0002-6989-9179>)
Maintainer: Kim Vertacnik <kim.vertacnik@mailbox.org>
Repository: CRAN
Date/Publication: 2024-02-20 20:20:02 UTC
Built: R 4.6.0; ; 2026-04-30 03:51:26 UTC; unix
