R: Fast Enrichment Analysis via Circular Permutations

# Fast Enrichment Analysis via Circular Permutations

## Documentation for package ‘shiftR’ version 1.5

- DESCRIPTION file
- User guides, package vignettes and other documentation

## Help Pages

shiftR-package | Fast Enrichment Analysis via Circular Permutations
cramerV | Calculate Cramer's V (phi) Coefficient
enrichmentAnalysis | Fast Enrichment Testing via Circular Permutations on Non-Binary Outcomes
getNOffsetsMax | Generate Random or Uniformly Spaced Permutation Offsets
getOffsetsAll | Generate Random or Uniformly Spaced Permutation Offsets
getOffsetsRandom | Generate Random or Uniformly Spaced Permutation Offsets
getOffsetsUniform | Generate Random or Uniformly Spaced Permutation Offsets
matchDatasets | Match Two Data Sets by Location
shiftrPermBinary | Fast Enrichment Testing on Binary Outcomes via Circular Permutations
shiftrPrepareLeft | Prepare Data for Fast Circular Permutation Analysis
shiftrPrepareRight | Prepare Data for Fast Circular Permutation Analysis
simulateBinary | Generate Artificial Data for Tests and Illustrations
simulateNumeric | Generate Artificial Data for Tests and Illustrations
simulatePValues | Generate Artificial Data for Tests and Illustrations
singlePermutation | Count Feature Overlap Under a Permutation