RadixForest             RadixForest
RadixTree               RadixTree
StarTree                StarTree
align_search            Alignment search
covid_cdr3              Adaptive COVID TCRB CDR3 data
covid_receptors         Adaptive COVID TCRB nucleotide rearrangements
dist_matrix             Compute distances between all combinations of
                        two sets of sequences
dist_pairwise           Pairwise distance between two sets of sequences
dist_search             Distance search for similar sequences
erase                   Erase sequences
generate_cost_matrix    Generate a simple cost matrix
has_sequence            Test sequence membership
insert                  Insert sequences
is_valid                Validate trie or forest structure
plot_tree               Plot trie or forest structure
prefix_search           Prefix search
radix_forest            Radix forest
radix_tree              Radix tree
result                  Return a fixed-tree self-similarity result
single_gap_search       Single-gap alignment search
size                    Count stored sequences
split_search            split_search
star_tree               Starcode-style fixed tree
to_string               Convert a trie or forest to a string
to_vector               Convert sequences to a character vector
