OUT_em_weights          Initial Value For Fitting the General Markov
                        Model
bayesian_boot_irrd      Obtaining Bayesian Bootstrap Sample for
                        Individual Risk Difference and Risk Ratio.
cif_est_usual           Estimating Three Cumulative Incidence Functions
                        Using the Usual Markov Model
conditional_cif_b       Estimating Three Conditional Cumulative
                        Incidence Functions Using the General Markov
                        Model Conditional on Random Effect
doPS                    Generate the Inverse Probability Treatment
                        Weights
em_illness_death_phmm_weight
                        Using EM Type Algorithm for MSM Illness-death
                        General Markov Model
get_hazard              Compute the (Cumulative) Baseline Hazard from
                        Cox Model
get_hazard_offset_weights
                        Compute the (Cumulative) Baseline Hazard from
                        Cox Model with Offsets
individual_RR_RD        Estimating Three Individual Risk Difference and
                        Risk Ratio Using the General Markov Model
                        Conditional on Predicted Random Effect
initial_fit_em_weights
                        Fit the MSM Cox Model with IP Weights
initial_lambda_em       Compute the Initial (Cumulative) Baseline
                        Hazard From the MSM Illness-death Model
plot.PS                 Plotting Histogram of Propensity Score and
                        Balancing Plot for Covariates in the Propensity
                        Score Model
sim_cox_msm_semicmrsk   Simulating Semi-competing Risks with
                        Right-censored Survival Data under Marginal
                        Structural Illness-death Cox Model
usual_illness_death_weight
                        Fit MSM Illness-death Usual Markov Model For
                        Semi-competing Risks Data
var_em_illness_death_phmm
                        Variance of parameters in MSM Illness-death
                        General Markov Model
