R: A Tool for Calculation and Optimization of the Expected Gain from Multi-Stage Selection

# A Tool for Calculation and Optimization of the Expected Gain from Multi-Stage Selection

## Documentation for package ‘selectiongain’ version 2.0.710

- DESCRIPTION file

## Help Pages

multistagecor | Function for calculating correlation matrix in a plant breeding context
multistagegain | Function for calculating the expected multi-stage selection gain
multistagegain.each | Function for calculating the selection gain in each stage
multistageoptimum.grid | Function for optimizing multi-stage selection with grid algorithm for a given correlation matrix
multistageoptimum.nlm | Function for optimizing n-stage selection with the NLM algorithm for a given correlation matrix
multistageoptimum.search | Function for optimizing three-stage selection in plant breeding with one marker-assisted selection stage and two phenotypic selection stages
multistageoptimum.searchIndexT | Function for optimizing three-stage selection in plant breeding with one marker-assisted selection stage and two phenotypic selection stages
multistageoptimum.searchThreeS | Function for optimizing four-stage selection in plant breeding with one marker-assisted selection stage and three phenotypic selection stages
multistagetp | Function for calculating the truncation points
multistagevariance | Expected variance after selection after k stages selection
SDselectiongain | Function for calculating the standrd deviation of selection gain