R: Mathematical and Statistical Tools in 'ribios'

# Mathematical and Statistical Tools in 'ribios'

## Documentation for package ‘ribiosMath’ version 1.2.0

- DESCRIPTION file
- Package NEWS
- Package README

## Help Pages

colKappa | Calculate column-wise kappa statistics of a matrix
cosdist | Calculate the cosine distance between two vectors (matrices)
cossim | Calculate the cosine similarity between two vectors (matrices)
davidClustering_kappa | Cluster rows of a Kappa-statistic-matrix by the hierarhical fuzzy multi-linkage partitioning method proposed by DAVID
davidClustering_kappa_R | Cluster rows of a Kappa-statistic-matrix by the hierarhical fuzzy multi-linkage partitioning method proposed by DAVID
empval | Get empirical p-value
kappaSimp | Calculate column-wise kappa statistics of a matrix, using a simple procedure by going through the matrix and counting
rowKappa | Calculate row-wise kappa statistics of a matrix
simulate_from_density | Simulate from density
tfidf | Calculate TF-IDF using a input matrix with terms in rows and documents in columns