Package: rdiversity
Type: Package
Title: Measurement and Partitioning of Similarity-Sensitive
        Biodiversity
Version: 2.2.0
Date: 2022-04-29
Authors@R: c(person("Sonia", "Mitchell", email = "sonia.mitchell@glasgow.ac.uk",
                  role = c("aut"), comment = c(ORCID = "0000-0003-1536-2066")),
             person("Richard", "Reeve", email = "richard.reeve@glasgow.ac.uk",
                  role = c("cre", "aut", "ths"), comment = c(ORCID = "0000-0003-2589-8091")),
             person("Tom", "White", email = "whitetomjames@gmail.com",
                  role = "ctb", comment = c(ORCID = "0000-0002-9639-3800")),
             person("Daniel", "Dörrhöfer", email = "ddo@openmailbox.org", role = "ctb"),
             person("Aaron", "Rudkin", email = "rudkin@ucla.edu", role = "ctb"))
Maintainer: Richard Reeve <richard.reeve@glasgow.ac.uk>
URL: https://github.com/boydorr/rdiversity
BugReports: https://github.com/boydorr/rdiversity/issues
Description: Provides a framework for the measurement and partitioning of
    the (similarity-sensitive) biodiversity of a metacommunity and its
    constituent subcommunities. Richard Reeve, et al. (2016) 
    <arXiv:1404.6520v3>.
License: GPL-3
Depends: R (>= 2.10)
Imports: methods, reshape2, stats, stringdist, utils
Suggests: ape, testthat, knitr, markdown, rmarkdown, covr
RoxygenNote: 7.1.2
Encoding: UTF-8
VignetteBuilder: knitr
Collate: 'ancestral_nodes.R' 'binary.R' 'chainsaw.R'
        'check_partition.R' 'check_phypartition.R' 'check_similarity.R'
        'class-distance.R' 'class-metacommunity.R' 'class-powermean.R'
        'class-relativeentropy.R' 'class-similarity.R'
        'descendant_tips.R' 'similarity.R' 'dist2sim.R' 'distance.R'
        'metadiv.R' 'subdiv.R' 'metacommunity.R'
        'diversity-components.R' 'diversity-measures.R' 'gen2dist.r'
        'geneid.R' 'genevec.R' 'hs_parameters.R' 'inddiv.R'
        'phy2branch.R' 'phy2dist.R' 'phy_abundance.R' 'phy_struct.R'
        'power_mean.R' 'powermean.R' 'rdiversity-package.R'
        'relativeentropy.R' 'repartition.R' 'smatrix.R' 'summarise.R'
        'tax2dist.R' 'taxfac.R' 'taxid.R' 'taxmask.R' 'taxvec.R'
        'tbar.R' 'zmatrix.R'
NeedsCompilation: no
Packaged: 2022-05-05 23:28:39 UTC; richardr
Author: Sonia Mitchell [aut] (<https://orcid.org/0000-0003-1536-2066>),
  Richard Reeve [cre, aut, ths] (<https://orcid.org/0000-0003-2589-8091>),
  Tom White [ctb] (<https://orcid.org/0000-0002-9639-3800>),
  Daniel Dörrhöfer [ctb],
  Aaron Rudkin [ctb]
Repository: CRAN
Date/Publication: 2022-05-06 07:00:02 UTC
Built: R 4.6.0; ; 2026-04-28 09:32:58 UTC; unix
