Package: phyloseqGraphTest
Title: Graph-Based Permutation Tests for Microbiome Data
Version: 0.1.1
Author: Julia Fukuyama [aut, cre]
Maintainer: Julia Fukuyama <julia.fukuyama@gmail.com>
Description: Provides functions for graph-based multiple-sample
    testing and visualization of microbiome data, in particular data
    stored in 'phyloseq' objects. The tests are based on those
    described in Friedman and Rafsky (1979)
    <http://www.jstor.org/stable/2958919>, and the tests are described
    in more detail in Callahan et al. (2016)
    <doi:10.12688/f1000research.8986.1>.
Imports: ggnetwork (>= 0.5.1), igraph (>= 1.1.2)
Depends: R (>= 3.5.0), ggplot2 (>= 2.2.1), phyloseq (>= 1.24.0)
License: CC0
Suggests: knitr, rmarkdown
VignetteBuilder: knitr
URL: https://github.com/jfukuyama/phyloseqGraphTest
biocViews:
RoxygenNote: 7.2.3
NeedsCompilation: no
Packaged: 2024-02-05 16:24:23 UTC; jfukuyam
Repository: CRAN
Date/Publication: 2024-02-05 19:00:02 UTC
Built: R 4.6.0; ; 2026-04-28 20:17:46 UTC; unix
