#NEXUS
[written Tue May 29 18:24:39 PDT 2007 by Mesquite  version 1.06 (build g97) at cnidaria-1347.ucdavis.edu/169.237.66.185]

BEGIN TAXA;
	DIMENSIONS NTAX=18;
	TAXLABELS
		Myrmecocystuscfnavajo Myrmecocystuscreightoni Myrmecocystusdepilis Myrmecocystuskathjuli Myrmecocystuskennedyi Myrmecocystusmendax Myrmecocystusmexicanus Myrmecocystusmimicus Myrmecocystusnavajo Myrmecocystusnequazcatl Myrmecocystusplacodops Myrmecocystusromainei Myrmecocystussemirufus Myrmecocystussnellingi Myrmecocystustenuinodis Myrmecocystustestaceus Myrmecocystuswheeleri Myrmecocystusyuma 
	;

END;


BEGIN CHARACTERS;
	TITLE Morphology;
	DIMENSIONS NCHAR=32;
	FORMAT DATATYPE = CONTINUOUS;
CHARSTATELABELS 
		1 eyewidth,
		2 eyelength,
		3 headlength,
		4 headwidth,
		5 mesosomaprofilehaircount,
		6 FLfemurlength,
		7 FLtibialength,
		8 MLfemurlength,
		9 MLtibialength,
		10 HLfemurlength,
		11 HLtibialength,
		12 mesosomalength,
		13 scapelength,
		14 funiculuslength,
		15 mesosomamaxwidth,
		16 mesosomaminwidth,
		17 lneyewidth,
		18 lneyelength,
		19 lnheadlength,
		20 lnheadwidth,
		21 lnmesosomaprofilehaircount,
		22 lnFLfemurlength,
		23 lnFLtibialength,
		24 lnMLfemurlength,
		25 lnMLtibialength,
		26 lnHLfemurlength,
		27 lnHLtibialength,
		28 lnmesosomalength,
		29 lnscapelength,
		30 lnfuniculuslength,
		31 lnmesosomamaxwidth,
		32 lnmesosomaminwidth ; 
	MATRIX
	Myrmecocystuscfnavajo    0.347 0.433 1.338 1.052 39.0 1.434 1.246 1.515 1.409 2.007 2.126 1.962 1.63 2.464 0.836 0.417 -1.058430499 -0.837017551 0.291175962 0.050693114 3.663561646 0.360467742 0.21993842 0.415415439 0.342880233 0.69664107 0.75424228 0.673964361 0.488580015 0.901786046 -0.179126666 -0.874669057
	Myrmecocystuscreightoni   0.1622 0.20655 0.82985 0.71865 0.0 0.8226 0.68895 0.7854 0.7704 1.0457 1.05835 1.11875 0.89955 1.4073 0.4955 0.28995 -1.819995314 -1.577954034 -0.187439126 -0.332990376 1.098612289 -0.198226599 -0.374805986 -0.242539085 -0.261554411 0.041684897 0.053820826 0.109048315 -0.106449058 0.340231802 -0.70254289 -1.243482504
	Myrmecocystusdepilis      0.2345 0.279 1.2125 1.0218 24.0 1.25183 1.0856245 1.31244 1.278025 1.70082 1.77591 1.774585 1.335 2.049 0.7741235 0.438396 -1.453769132 -1.2784033 0.185730051 0.015758636 3.163968392 0.217906079 0.073480925 0.262244849 0.23828925 0.523667061 0.565922636 0.566419189 0.284385731 0.712661014 -0.266387722 -0.827757638
	Myrmecocystuskathjuli     0.206 0.247 1.1235 0.951 19.5 1.35352 1.101125 1.39927 1.29104 1.708335 1.794895 1.70561 1.379 2.04 0.7319725 0.4122135 -1.579985164 -1.398768684 0.115861323 -0.05067484 2.890371758 0.299777539 0.092762585 0.334283576 0.252849066 0.529578184 0.581198779 0.53251657 0.319877422 0.710946449 -0.315164554 -0.88802496
	Myrmecocystuskennedyi     0.219 0.277 1.2115 1.075 27.5 1.405 1.176 1.4625 1.456 1.8545 1.9205 1.8345 1.4375 2.1 0.7655 0.455 -1.518693975 -1.283737773 0.191857133 0.072285615 3.314020688 0.339154824 0.16141842 0.379143386 0.373863136 0.615804395 0.650805137 0.606659596 0.362132481 0.741737305 -0.267251876 -0.788424862
	Myrmecocystusmendax       0.2721 0.3336 1.558 1.4531 85.0 1.8742 1.6042 1.994 1.935 2.6013 2.6829 2.5963 1.9381 2.9722 1.0311 0.5232 -1.301585633 -1.097812608 0.443402947 0.373699205 4.442651256 0.628181902 0.47262519 0.690142672 0.660107326 0.95601132 0.986898299 0.954087355 0.661708112 1.089302419 0.030626194 -0.647791479
	Myrmecocystusmexicanus    0.4335 0.5285 1.602 1.2705 26.5 2.242 1.8555 2.4795 2.2075 3.0705 3.089 2.597 2.211 3.239 0.916 0.394 -0.837335004 -0.642862653 0.466427394 0.227429133 3.275540168 0.796749683 0.612629812 0.902886082 0.785535617 1.116397202 1.124535193 0.952838633 0.792756695 1.172973609 -0.096394475 -0.93952217
	Myrmecocystusmimicus      0.2197 0.2733 1.141 1.036 30.0 1.23793 1.027 1.26786 1.1749 1.56482 1.63226 1.67201 1.264 1.881 0.708 0.384 -1.5154923 -1.297185186 0.131905071 0.035367144 3.401197382 0.21344063 0.026641931 0.23733044 0.161183038 0.447770801 0.489965558 0.514026496 0.234281296 0.63180355 -0.345311185 -0.957112726
	Myrmecocystusnavajo       0.2805 0.3755 1.0525 0.795 18.5 1.168535 1.0180075 1.16102 1.12958 1.634705 1.65155 1.546225 1.3485 1.954 0.6263965 0.314671 -1.272519447 -0.980051192 0.050015872 -0.230223916 2.90855558 0.153682711 0.016748671 0.148877742 0.121090106 0.491448376 0.501633856 0.434955774 0.298626416 0.669236464 -0.468766381 -1.171358882
	Myrmecocystusnequazcatl   0.238 0.295 1.058 1.118 49.0 1.51118 1.1793 1.60672 1.41636 1.95228 1.96042 2.01975 1.477 2.228 0.84806 0.486044 -1.435484605 -1.220779923 0.056380333 0.111541375 3.891820298 0.412890803 0.164921042 0.474194834 0.3480902 0.66899792 0.673158736 0.702973741 0.390013004 0.801104322 -0.164803891 -0.721456124
	Myrmecocystusplacodops    0.2805 0.347 1.5425 1.4355 39.5 1.6688 1.474045 1.838315 1.761365 2.349265 2.418685 2.28195 1.8045 2.7645 0.955494 0.484641 -1.271539142 -1.058496944 0.433360292 0.360682154 3.675579114 0.512103438 0.387068202 0.606349823 0.563245783 0.852964487 0.881290662 0.824898518 0.589936973 1.015395403 -0.047278511 -0.724537171
	Myrmecocystusromainei     0.229 0.271 1.164 1.067 27.0 1.31488 1.06962 1.369 1.278 1.74 1.78517 1.72 1.346 2.081 0.797 0.421 -1.474033275 -1.305636458 0.151862349 0.064850972 3.295836866 0.273745407 0.067303445 0.314080546 0.245296356 0.553885113 0.579513649 0.542324291 0.297137231 0.732848547 -0.2269006 -0.865122445
	Myrmecocystussemirufus    0.2393 0.295 1.3424 1.2826 69.0 1.548 1.3236 1.626 1.611 2.074 2.272 2.0392 1.572 2.3424 0.8935 0.4917 -1.430037284 -1.220779923 0.294459057 0.248889268 4.234106505 0.436963775 0.280355297 0.486123011 0.476855104 0.72947911 0.820660501 0.712557574 0.452348694 0.851176045 -0.112608944 -0.709886505
	Myrmecocystussnellingi    0.1626 0.2052 0.786 0.69185 17.0 0.7471 0.5778 0.71195 0.68865 0.95225 0.93645 1.02635 0.83555 1.3684 0.47505 0.2805 -1.819869438 -1.586743338 -0.244666624 -0.374320538 2.83148024 -0.296208766 -0.554168612 -0.349125994 -0.38004857 -0.051854551 -0.071457181 0.020580617 -0.182376816 0.309479365 -0.750825896 -1.272022688
	Myrmecocystustenuinodis   0.16695 0.2165 0.80965 0.69565 15.5 0.82035 0.79215 0.82915 0.7881 1.02385 1.0765 1.0843 0.89445 1.37155 0.5079 0.2895 -1.794140731 -1.531128383 -0.212724354 -0.364765146 2.714672815 -0.201043311 -0.233005565 -0.188002646 -0.240303423 0.023136261 0.071803358 0.077801384 -0.1121299 0.313462769 -0.679348936 -1.244818912
	Myrmecocystustestaceus    0.271 0.3475 1.0435 0.8825 23.5 1.11074 0.981997 1.145875 1.10783 1.527625 1.55838 1.505275 1.329 2.018 0.6360145 0.288181 -1.305643267 -1.057223576 0.041499168 -0.125900131 3.14578457 0.102786566 -0.021927567 0.135585284 0.099368885 0.423310977 0.441300868 0.408161226 0.283878423 0.701812041 -0.453369253 -1.244254341
	Myrmecocystuswheeleri     0.197 0.259 1.153 0.981 32.0 1.34961 1.11238 1.43273 1.26582 1.62673 1.75947 1.77914 1.427 2.058 0.732 0.394545 -1.62455155 -1.350927217 0.142367241 -0.019182819 3.465735903 0.299815662 0.106501864 0.359581715 0.235720134 0.486571865 0.565012627 0.576130101 0.355574338 0.721734637 -0.311974765 -0.930022077
	Myrmecocystusyuma         0.189 0.237 0.864 0.809 10.0 0.867184 0.783 0.878905 0.757646 1.0528 1.15593 1.14947 0.932 1.437 0.549142 0.319 -1.666008264 -1.439695138 -0.14618251 -0.211956362 2.302585093 -0.142504099 -0.244622583 -0.129078464 -0.277539021 0.051453282 0.144905215 0.139300967 -0.070422464 0.362557607 -0.599398219 -1.142564176

;

END;


BEGIN CHARACTERS;
	TITLE  Foraging;
	DIMENSIONS  NCHAR=2;
	FORMAT DATATYPE = STANDARD GAP = - MISSING = ? SYMBOLS = "  0 1 2";
	CHARSTATELABELS 
		1 time /  diurnal crepuscular nocturnal, 2 subgenus /  Endiodioctes Eremnocystus Myrmecocystus ; 
	MATRIX
	Myrmecocystuscfnavajo   22

	Myrmecocystuscreightoni  11

	Myrmecocystusdepilis     00

	Myrmecocystuskathjuli    00

	Myrmecocystuskennedyi    00

	Myrmecocystusmendax      00

	Myrmecocystusmexicanus   22

	Myrmecocystusmimicus     00

	Myrmecocystusnavajo      22

	Myrmecocystusnequazcatl  00

	Myrmecocystusplacodops   00

	Myrmecocystusromainei    00

	Myrmecocystussemirufus   00

	Myrmecocystussnellingi   11

	Myrmecocystustenuinodis  11

	Myrmecocystustestaceus   12

	Myrmecocystuswheeleri    00

	Myrmecocystusyuma        11


;

END;


BEGIN TREES;
	TRANSLATE
		1 Myrmecocystuscfnavajo,
		2 Myrmecocystuscreightoni,
		3 Myrmecocystusdepilis,
		4 Myrmecocystuskathjuli,
		5 Myrmecocystuskennedyi,
		6 Myrmecocystusmendax,
		7 Myrmecocystusmexicanus,
		8 Myrmecocystusmimicus,
		9 Myrmecocystusnavajo,
		10 Myrmecocystusnequazcatl,
		11 Myrmecocystusplacodops,
		12 Myrmecocystusromainei,
		13 Myrmecocystussemirufus,
		14 Myrmecocystussnellingi,
		15 Myrmecocystustenuinodis,
		16 Myrmecocystustestaceus,
		17 Myrmecocystuswheeleri,
		18 Myrmecocystusyuma;
	TREE bestML = (((((((((13:1.724765,11:1.724765):2.926053,6:4.650818):0.689044,(4:1.08387,17:1.08387):4.255993):0.198842,((8:2.708942,3:2.708942):2.027251,((12:2.193845,10:2.193845):2.257581,18:4.451425):0.284767):0.802512):0.506099,5:6.044804):4.524387,2:10.569191):0.836689,(14:2.770378,15:2.770378):8.635503):0.89482,16:12.300701):1.699299,(7:5.724923,(1:2.869547,9:2.869547):2.855375):8.275077);

END;

BEGIN ASSUMPTIONS;
	TYPESET * UNTITLED  (CHARACTERS = 'Morphology')  =  Squared:  1 -  32;
END;



Begin MESQUITE;
		MESQUITESCRIPTVERSION 2;
		TITLE AUTO;
		tell ProjectCoordinator;
		getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa;
		tell It;
			setID 0 9015005506118934442;
		endTell;
		getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters;
		tell It;
			setID 0 2565950173085067248;
			checksum 0 389122022;
			setID 1 1161953040649633474;
			checksum 1 3582198254;
		endTell;
		getEmployee  #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord;
		tell It;
			showDataWindow #2565950173085067248 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker;
			tell It;
				getWindow;
				tell It;
					setSize 420 280;
					setLocation 400 156;
					setFont SanSerif;
					setFontSize 10;
					onInfoBar;
					setExplanationSize 30;
					setAnnotationSize 20;
					setFontIncAnnot 0;
					setFontIncExp 0;
					getToolPalette;
					tell It;
					endTell;
					setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow;
					colorCells  #mesquite.charMatrices.NoColor.NoColor;
					setBackground White;
					toggleShowNames on;
					toggleTight off;
					toggleShowChanges on;
					toggleSeparateLines off;
					toggleShowStates on;
					toggleAutoWithCharNames on;
					toggleShowDefaultCharNames off;
					toggleConstrainCW on;
					toggleBirdsEye off;
					toggleColorsPanel off;
					birdsEyeWidth 2;
					toggleLinkedScrolling on;
					toggleScrollLinkedTables off;
				endTell;
				showWindow;
				getWindow;
				tell It;
					forceAutosize;
				endTell;
				getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel;
				tell It;
					togglePanel off;
				endTell;
				getEmployee #mesquite.charMatrices.ColorCells.ColorCells;
				tell It;
					setColor Red;
					removeColor off;
				endTell;
			endTell;
			showDataWindow #1161953040649633474 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker;
			tell It;
				getWindow;
				tell It;
					getTable;
					tell It;
						rowNamesWidth 232;
					endTell;
					setSize 798 748;
					setLocation 348 22;
					setFont SanSerif;
					setFontSize 10;
					onInfoBar;
					setExplanationSize 30;
					setAnnotationSize 20;
					setFontIncAnnot 0;
					setFontIncExp 0;
					getToolPalette;
					tell It;
						setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.ibeam;
					endTell;
					setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.ibeam;
					colorCells  #mesquite.charMatrices.NoColor.NoColor;
					setBackground White;
					toggleShowNames on;
					toggleTight off;
					toggleShowChanges on;
					toggleSeparateLines off;
					toggleShowStates on;
					toggleAutoWithCharNames on;
					toggleShowDefaultCharNames off;
					toggleConstrainCW on;
					toggleBirdsEye off;
					toggleColorsPanel off;
					birdsEyeWidth 2;
					toggleLinkedScrolling on;
					toggleScrollLinkedTables off;
				endTell;
				showWindow;
				getWindow;
				tell It;
					forceAutosize;
				endTell;
				getEmployee #mesquite.categ.StateNamesEditor.StateNamesEditor;
				tell It;
					makeWindow;
					tell It;
						setSize 314 400;
						setLocation 60 10;
						setFont SanSerif;
						setFontSize 10;
						onInfoBar;
						setExplanationSize 30;
						setAnnotationSize 20;
						setFontIncAnnot 0;
						setFontIncExp 0;
						getToolPalette;
						tell It;
							setTool mesquite.categ.StateNamesEditor.StateNamesWindow.ibeam;
						endTell;
						rowsAreCharacters on;
						toggleConstrainChar on;
						toggleConstrainCharNum 3;
						togglePanel off;
					endTell;
					showWindow;
				endTell;
				getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip;
				tell It;
					showStrip off;
				endTell;
				getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel;
				tell It;
					togglePanel off;
				endTell;
				getEmployee #mesquite.charMatrices.ColorCells.ColorCells;
				tell It;
					setColor Red;
					removeColor off;
				endTell;
				getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector;
				tell It;
					autotabOff;
				endTell;
			endTell;
		endTell;
		getEmployee  #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord;
		tell It;
			makeTreeWindow #9015005506118934442  #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker;
			tell It;
				setTreeSource  #mesquite.trees.StoredTrees.StoredTrees;
				tell It;
					setTreeBlock 1;
					toggleUseWeights off;
				endTell;
				setAssignedID 630.1180487973731.4514395117633566598;
				getTreeWindow;
				tell It;
					setSize 520 400;
					setLocation 60 10;
					setFont SanSerif;
					setFontSize 10;
					onInfoBar;
					setExplanationSize 30;
					setAnnotationSize 20;
					setFontIncAnnot 0;
					setFontIncExp 0;
					getToolPalette;
					tell It;
					endTell;
					setActive;
					getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator;
				tell It;
					suppress;
					setTreeDrawer  #mesquite.trees.DiagonalDrawTree.DiagonalDrawTree;
					tell It;
						setEdgeWidth 12;
						orientUp;
						getEmployee #mesquite.trees.NodeLocsStandard.NodeLocsStandard;
						tell It;
							stretchToggle off;
							branchLengthsToggle off;
							toggleScale on;
							toggleCenter off;
							toggleEven off;
							namesAngle ?;
						endTell;
					endTell;
					setBackground White;
					setBranchColor Black;
					showNodeNumbers off;
					labelBranchLengths off;
					desuppress;
					getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames;
					tell It;
						setColor Black;
						toggleColorPartition on;
						toggleShadePartition off;
						toggleNodeLabels on;
						toggleShowNames on;
					endTell;
				endTell;
					setTreeNumber 1;
					useSuggestedSize on;
					toggleTextOnTree off;
					newAssistant  #mesquite.ancstates.TraceCharacterHistory.TraceCharacterHistory;
				tell It;
					suspend ;
					setDisplayMode  #mesquite.ancstates.ShadeStatesOnTree.ShadeStatesOnTree;
					tell It;
						toggleLabels off;
					endTell;
					setHistorySource  #mesquite.ancstates.RecAncestralStates.RecAncestralStates;
					tell It;
						getCharacterSource  #mesquite.charMatrices.CharSrcCoordObed.CharSrcCoordObed;
						tell It;
							setCharacterSource #mesquite.charMatrices.StoredCharacters.StoredCharacters;
							tell It;
								setDataSet #1161953040649633474;
							endTell;
						endTell;
						setMethod  #mesquite.parsimony.ParsAncestralStates.ParsAncestralStates;
						tell It;
							setModelSource  #mesquite.parsimony.CurrentParsModels.CurrentParsModels;
						endTell;
					endTell;
					setCharacter 1;
					toggleShowLegend on;
					toggleGray off;
					toggleWeights on;
					setInitialOffsetX -162;
					setInitialOffsetY -177;
					setLegendWidth 142;
					setLegendHeight 177;
					resume ;
				endTell;
				endTell;
				showWindow;
				getEmployee #mesquite.ornamental.BranchNotes.BranchNotes;
				tell It;
					setAlwaysOn off;
				endTell;
				getEmployee #mesquite.trees.ColorBranches.ColorBranches;
				tell It;
					setColor Red;
					removeColor off;
				endTell;
			endTell;
		endTell;
		endTell;
end;

begin brownie;
taxset all=1-18;
end;
