R: Plant Photobiology Related Functions and Data

# Plant Photobiology Related Functions and Data

## Documentation for package ‘photobiologyPlants’ version 0.6.1-1

- DESCRIPTION file
- User guides, package vignettes and other documentation
- Package NEWS
- Package README

## Help Pages

photobiologyPlants-package | photobiologyPlants: Plant Photobiology Related Functions and Data
Betula_ermanii.mspct | Spectral data for 'Betula ermanii' leaves
B_G | Calculate photon ratios from spectral irradiance
carotenoids.mspct | Absorbance spectra for carotenoids.
chlorophylls.mspct | Absorbance spectra for chlorophylls.
chlorophylls_fluorescence.mspct | Fluorescence emission spectra for chlorophylls.
CRYs.mspct | CRY1, CRY2 and CRY3 absorbance spectra.
ET_ref | Evapotranspiration
ET_ref_day | Evapotranspiration
FR_ePAR | Calculate photon ratios from spectral irradiance
FR_PAR | Calculate photon ratios from spectral irradiance
FR_RpFR | Calculate photon ratios from spectral irradiance
leaf_fluorescence.mspct | Fluorescence emission spectra of leaves.
McCree_photosynthesis.mspct | McCree's action spectra for whole-leaf photosynthesis.
net_irradiance | Net radiation flux
Pfr_Ptot | Calculate phytochrome photoequilibrium
Pfr_Ptot.default | Calculate phytochrome photoequilibrium
Pfr_Ptot.numeric | Calculate phytochrome photoequilibrium
Pfr_Ptot.source_spct | Calculate phytochrome photoequilibrium
Pfr_Ptot_R_FR | Pr:Ptot ratio (photoequilibrium) from R:FR photon ratio.
photobiologyPlants | photobiologyPlants: Plant Photobiology Related Functions and Data
photon irradiances | Constrained extended PAR from spectral irradiance
photon ratios | Calculate photon ratios from spectral irradiance
PHOTs.mspct | PHOT1 and PHOT2 absorbance spectra.
PHYs.mspct | Tabulated data for Phytochrome Sigma
phytochrome.spct | Tabulated data for Phytochrome Sigma
Phy_reaction_rates | Phytochrome reaction rates
Phy_Sigma | Phytochrome Sigma as a function of wavelength
Phy_Sigma_FR | Pfr Sigma as a function of wavelength
Phy_Sigma_R | Pr Sigma as a function of wavelength
psychrometric_constant | Water vapour pressure
R_FR | Calculate photon ratios from spectral irradiance
R_RpFR | Calculate photon ratios from spectral irradiance
Solidago_altissima.mspct | Spectral optical data for 'Solidago altissima' leaves
UVA1_UV | Calculate photon ratios from spectral irradiance
UVA1_UVA | Calculate photon ratios from spectral irradiance
UVA2_UV | Calculate photon ratios from spectral irradiance
UVA2_UVA | Calculate photon ratios from spectral irradiance
UVAlw_UV | Calculate photon ratios from spectral irradiance
UVAsw_UV | Calculate photon ratios from spectral irradiance
UVA_PAR | Calculate photon ratios from spectral irradiance
UVA_UV | Calculate photon ratios from spectral irradiance
UVB_PAR | Calculate photon ratios from spectral irradiance
UVB_UV | Calculate photon ratios from spectral irradiance
UVB_UVA | Calculate photon ratios from spectral irradiance
UVR8s.mspct | UVR8 absorbance spectrum
UV_PAR | Calculate photon ratios from spectral irradiance
water_dp | Water vapour pressure
water_fp | Water vapour pressure
water_mvc2vp | Water vapour pressure
water_RH2vp | Water vapour pressure
water_vp2mvc | Water vapour pressure
water_vp2RH | Water vapour pressure
water_vp_sat | Water vapour pressure
water_vp_sat_slope | Water vapour pressure
xPAR_irrad | Constrained extended PAR from spectral irradiance
xPAR_irrad.default | Constrained extended PAR from spectral irradiance
xPAR_irrad.source_mspct | Constrained extended PAR from spectral irradiance
xPAR_irrad.source_spct | Constrained extended PAR from spectral irradiance
ZTLs.mspct | ZTL absorbance spectra.