R: Pedigree Functions

# Pedigree Functions

## Documentation for package ‘pedigree’ version 1.4.2

- DESCRIPTION file

## Help Pages

pedigree-package | Package to deal with pedigree data
add.Inds | Function to add missing individuals to a pedigree
blup | Function to calculate breeding values using an animal model
calcG | Function to calculate a relationship matrix from marker data (usually allele count data), G matrix.
calcInbreeding | Calculates inbreeding coefficients for individuals in a pedigree.
countGen | Count generation number for each individual in a pedigree.
countOff | Function that counts the number of offspring (and following generations for each individual in a pedigree.
gblup | Function to calculate breeding values using an animal model and a relationship matrix calculated from the markers (G matrix)
makeA | Makes the A matrix for a part of a pedigree
makeAinv | Makes inverted A matrix for a pedigree
orderPed | Orders a pedigree
pedigree | Package to deal with pedigree data
trimPed | Function to trim a pedigree based on available data