add_alpha               Add alpha for a Rcolor
add_analysis            Add an analysis for a project
add_theme               Add a global gg_theme and colors for plots
change_fac_lev          Change factor levels
check_directory_structure
                        Check if a directory structure matches the
                        expected structure
china_map               Plot china map
copy_df                 Copy a data.frame
copy_vector             Copy a vector
count2                  Like 'uniq -c' in shell to count a vector
dabiao                  Print some message with =
del_ps                  Detach packages
df2distance             Convert Three-column Data to Distance Matrix
df2link                 df to link table
distance2df             Convert a distance matrix to a data frame
download2               Download File
download_ncbi_genome_file
                        Download genome files from NCBI based on
                        accession number
explode                 Explode a data.frame if there are split charter
                        in one column
fittest                 Fit a distribution
generate_labels         Generate labels position
get_cols                Get n colors
get_legend2             Get a legend from a ggplot object
gghist                  gg histogram
gghuan                  Plot a doughnut chart
gghuan2                 gghuan2 for multi-doughnut chart
ggmosaic                ggmosaic for mosaic plot
ggplot_lim              Get a ggplot xlim and ylim
ggplot_translator       Translate axis label of a ggplot
grepl.data.frame        Grepl applied on a data.frame
group_box               Plot a boxplot
group_test              Performs multiple mean comparisons for a
                        data.frame
gsub.data.frame         Gsub applied on a data.frame
guolv                   Filter your data
hebing                  Group your data
hebing2                 Group your data
how_to_set_font_for_plot
                        How to set font for ggplot
how_to_set_options      How to set options in a package
how_to_update_parameters
                        How to update parameters
how_to_use_parallel     How to use parallel
how_to_use_sbatch       How to use sbatch
igraph_translator       Translate text of igraph
is.ggplot.color         Judge if a characteristic is Rcolor
legend_size             Scale a legend size
lib_ps                  Attach packages or install packages have not
                        benn installed
list_to_dataframe       Trans list (with NULL) to data.frame
little_guodong          My cat
lm_coefficients         Get coefficients of linear regression model
make_gitbook            Make a Gitbook using bookdown
make_project            Make a R-analysis project
make_py_pkg             Make a new python package
match_df                Match otutab and metadata
metadata                test data for pcutils package
mmscale                 Min_Max scale
multireg                Multiple regression/ variance decomposition
                        analysis
multitest               Multi-groups test
my_cat                  Show my little cat named Guo Dong which drawn
                        by my girlfriend.
my_circle_packing       My Circle packing plot
my_circo                My circo plot
my_lm                   Fit a linear model and plot
my_sunburst             My Sunburst plot
my_treemap              My Treemap plot
my_voronoi_treemap      My Voronoi treemap plot
otutab                  test data for pcutils package
plot.coefficients       Plot coefficients as a bar chart or lollipop
                        chart
plotgif                 Plot a gif
plotpdf                 Plot a multi-pages pdf
pre_number_str          Prepare a numeric string
prepare_package         Prepare a package
read.file               Read some special format file
read_fasta              Read fasta file
remove.outliers         Remove outliers
rgb2code                Transform a rgb vector to a Rcolor code
rm_low                  Remove the low relative items in each column
sample_map              Plot the sampling map
sanxian                 Three-line table
scale_color_pc          Scale a fill color
scale_fill_pc           Scale a fill color
search_browse           Search and browse the web for specified terms
set_pcutils_config      Set config
show_pcutils_config     Show config
split_text              Split text into parts, each not exceeding a
                        specified character count
squash                  Squash one column in a data.frame using other
                        columns as id.
stackplot               Plot a stack plot
strsplit2               Split Composite Names
t2                      Transpose data.frame
tax_pie                 Pie plot
taxonomy                test data for pcutils package
tidai                   Replace a vector by named vector
trans                   Trans format your data
trans_format            Transfer the format of file
translator              Translator
twotest                 Two-group test
update_NEWS_md          Update the NEW.md for a package
update_param            Update the parameters
venn                    Plot a general venn (upset, flower)
write_fasta             Write a data.frame to fasta
