R: Package for Analysis of Space-Time Ecological Series

# Package for Analysis of Space-Time Ecological Series

## Documentation for package ‘pastecs’ version 1.4.2

- DESCRIPTION file
- User guides, package vignettes and other documentation

## Help Pages

.gleissberg.table | Table of probabilities according to the Gleissberg distribution
abund | Sort variables by abundance
AutoD2 | AutoD2, CrossD2 or CenterD2 analysis of a multiple time-series
bnr | A data frame of 163 benthic species measured across a transect
buysbal | Buys-Ballot table
CenterD2 | AutoD2, CrossD2 or CenterD2 analysis of a multiple time-series
CrossD2 | AutoD2, CrossD2 or CenterD2 analysis of a multiple time-series
daystoyears | Convert time units from "days" to "years" or back
decaverage | Time series decomposition using a moving average
deccensus | Time decomposition using the CENSUS II method
decdiff | Time series decomposition using differences (trend elimination)
decevf | Time series decomposition using eigenvector filtering (EVF)
decloess | Time series decomposition by the LOESS method
decmedian | Time series decomposition using a running median
decreg | Time series decomposition using a regression model
disjoin | Complete disjoined coded data (binary coding)
disto | Compute and plot a distogram
escouf | Choose variables using the Escoufier's equivalent vectors method
extract | Extract a subset of the original dataset
extract.abund | Sort variables by abundance
extract.escouf | Choose variables using the Escoufier's equivalent vectors method
extract.regul | Regulation of one or several time series using various methods
extract.tsd | Decomposition of one or several regular time series using various methods
extract.turnogram | Calculate and plot a turnogram for a regular time series
extract.turnpoints | Analyze turning points (peaks or pits)
first | Get the first element of a vector
GetUnitText | Format a nice time units for labels in graphs
hist.regul | Regulation of one or several time series using various methods
identify.abund | Sort variables by abundance
identify.escouf | Choose variables using the Escoufier's equivalent vectors method
identify.local.trend | Calculate local trends using cumsum
identify.regul | Regulation of one or several time series using various methods
identify.turnogram | Calculate and plot a turnogram for a regular time series
is.tseries | Is this object a time series?
last | Get the last element of a vector
lines.abund | Sort variables by abundance
lines.escouf | Choose variables using the Escoufier's equivalent vectors method
lines.regul | Regulation of one or several time series using various methods
lines.stat.slide | Sliding statistics
lines.turnpoints | Analyze turning points (peaks or pits)
local.trend | Calculate local trends using cumsum
marbio | Several zooplankton taxa measured across a transect
marphy | Physico-chemical records at the same stations as for marbio
match.tol | Determine matching observation with a tolerance in time-scale
pennington | Calculate Pennington statistics
pgleissberg | Gleissberg distribution probability
plot.abund | Sort variables by abundance
plot.escouf | Choose variables using the Escoufier's equivalent vectors method
plot.regul | Regulation of one or several time series using various methods
plot.stat.slide | Sliding statistics
plot.tsd | Decomposition of one or several regular time series using various methods
plot.turnogram | Calculate and plot a turnogram for a regular time series
plot.turnpoints | Analyze turning points (peaks or pits)
print.abund | Sort variables by abundance
print.escouf | Choose variables using the Escoufier's equivalent vectors method
print.regul | Regulation of one or several time series using various methods
print.specs.regul | Regulation of one or several time series using various methods
print.specs.tsd | Decomposition of one or several regular time series using various methods
print.stat.slide | Sliding statistics
print.summary.abund | Sort variables by abundance
print.summary.escouf | Choose variables using the Escoufier's equivalent vectors method
print.summary.regul | Regulation of one or several time series using various methods
print.summary.tsd | Decomposition of one or several regular time series using various methods
print.summary.turnogram | Calculate and plot a turnogram for a regular time series
print.summary.turnpoints | Analyze turning points (peaks or pits)
print.tsd | Decomposition of one or several regular time series using various methods
print.turnogram | Calculate and plot a turnogram for a regular time series
print.turnpoints | Analyze turning points (peaks or pits)
regarea | Regulate a series using the area method
regconst | Regulate a series using the constant value method
reglin | Regulation of a series using a linear interpolation
regspline | Regulation of a time series using splines
regul | Regulation of one or several time series using various methods
regul.adj | Adjust regulation parameters
regul.screen | Test various regulation parameters
releve | A data frame of six phytoplankton taxa followed in time at one station
specs | Collect parameters ("specifications") from one object to use them in another analysis
specs.regul | Regulation of one or several time series using various methods
specs.tsd | Decomposition of one or several regular time series using various methods
stat.desc | Descriptive statistics on a data frame or time series
stat.pen | Pennington statistics on a data frame or time series
stat.slide | Sliding statistics
summary.abund | Sort variables by abundance
summary.escouf | Choose variables using the Escoufier's equivalent vectors method
summary.regul | Regulation of one or several time series using various methods
summary.tsd | Decomposition of one or several regular time series using various methods
summary.turnogram | Calculate and plot a turnogram for a regular time series
summary.turnpoints | Analyze turning points (peaks or pits)
trend.test | Test if an increasing or decreasing trend exists in a time series
tsd | Decomposition of one or several regular time series using various methods
tseries | Convert a 'regul' or a 'tsd' object into a time series
turnogram | Calculate and plot a turnogram for a regular time series
turnpoints | Analyze turning points (peaks or pits)
vario | Compute and plot a semi-variogram
yearstodays | Convert time units from "days" to "years" or back