travis_fold:start:worker_info
[0K[33;1mWorker information[0m
hostname: 7b6249ae-0183-4c3a-a57c-0b97b6e7c2bd@1.production-1-worker-org-06-packet.packet-ewr1.travisci.net
version: v4.0.0 https://github.com/travis-ci/worker/tree/e5cb567e10c0eefe380e81c9a2229ac8fb6a16ce
instance: 6385e32 travisci/ci-garnet:packer-1512502276-986baf0 (via amqp)
startup: 1.505124973s
travis_fold:end:worker_info
[0Ktravis_fold:start:system_info
[0K[33;1mBuild system information[0m
Build language: r
Build group: stable
Build dist: trusty
Build id: 414253172
Job id: 414253173
Runtime kernel version: 4.4.0-112-generic
travis-build version: afa768cd5
[34m[1mBuild image provisioning date and time[0m
Tue Dec  5 20:11:19 UTC 2017
[34m[1mOperating System Details[0m
Distributor ID:	Ubuntu
Description:	Ubuntu 14.04.5 LTS
Release:	14.04
Codename:	trusty
[34m[1mCookbooks Version[0m
7c2c6a6 https://github.com/travis-ci/travis-cookbooks/tree/7c2c6a6
[34m[1mgit version[0m
git version 2.15.1
[34m[1mbash version[0m
GNU bash, version 4.3.11(1)-release (x86_64-pc-linux-gnu)
[34m[1mgcc version[0m
gcc (Ubuntu 4.8.4-2ubuntu1~14.04.3) 4.8.4
Copyright (C) 2013 Free Software Foundation, Inc.
This is free software; see the source for copying conditions.  There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

[34m[1mdocker version[0m
Client:
 Version:      17.09.0-ce
 API version:  1.32
 Go version:   go1.8.3
 Git commit:   afdb6d4
 Built:        Tue Sep 26 22:39:28 2017
 OS/Arch:      linux/amd64
[34m[1mclang version[0m
clang version 5.0.0 (tags/RELEASE_500/final)
Target: x86_64-unknown-linux-gnu
Thread model: posix
InstalledDir: /usr/local/clang-5.0.0/bin
[34m[1mjq version[0m
jq-1.5
[34m[1mbats version[0m
Bats 0.4.0
[34m[1mshellcheck version[0m
0.4.6
[34m[1mshfmt version[0m
v2.0.0
[34m[1mccache version[0m
ccache version 3.1.9

Copyright (C) 2002-2007 Andrew Tridgell
Copyright (C) 2009-2011 Joel Rosdahl

This program is free software; you can redistribute it and/or modify it under
the terms of the GNU General Public License as published by the Free Software
Foundation; either version 3 of the License, or (at your option) any later
version.
[34m[1mcmake version[0m
cmake version 3.9.2

CMake suite maintained and supported by Kitware (kitware.com/cmake).
[34m[1mheroku version[0m
heroku-cli/6.14.39-addc925 (linux-x64) node-v9.2.0
[34m[1mimagemagick version[0m
Version: ImageMagick 6.7.7-10 2017-07-31 Q16 http://www.imagemagick.org
[34m[1mmd5deep version[0m
4.2
[34m[1mmercurial version[0m
Mercurial Distributed SCM (version 4.2.2)
(see https://mercurial-scm.org for more information)

Copyright (C) 2005-2017 Matt Mackall and others
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
[34m[1mmysql version[0m
mysql  Ver 14.14 Distrib 5.6.33, for debian-linux-gnu (x86_64) using  EditLine wrapper
[34m[1mopenssl version[0m
OpenSSL 1.0.1f 6 Jan 2014
[34m[1mpacker version[0m
Packer v1.0.2

Your version of Packer is out of date! The latest version
is 1.1.2. You can update by downloading from www.packer.io
[34m[1mpostgresql client version[0m
psql (PostgreSQL) 9.6.6
[34m[1mragel version[0m
Ragel State Machine Compiler version 6.8 Feb 2013
Copyright (c) 2001-2009 by Adrian Thurston
[34m[1msubversion version[0m
svn, version 1.8.8 (r1568071)
   compiled Aug 10 2017, 17:20:39 on x86_64-pc-linux-gnu

Copyright (C) 2013 The Apache Software Foundation.
This software consists of contributions made by many people;
see the NOTICE file for more information.
Subversion is open source software, see http://subversion.apache.org/

The following repository access (RA) modules are available:

* ra_svn : Module for accessing a repository using the svn network protocol.
  - with Cyrus SASL authentication
  - handles 'svn' scheme
* ra_local : Module for accessing a repository on local disk.
  - handles 'file' scheme
* ra_serf : Module for accessing a repository via WebDAV protocol using serf.
  - using serf 1.3.3
  - handles 'http' scheme
  - handles 'https' scheme

[34m[1msudo version[0m
Sudo version 1.8.9p5
Configure options: --prefix=/usr -v --with-all-insults --with-pam --with-fqdn --with-logging=syslog --with-logfac=authpriv --with-env-editor --with-editor=/usr/bin/editor --with-timeout=15 --with-password-timeout=0 --with-passprompt=[sudo] password for %p:  --without-lecture --with-tty-tickets --disable-root-mailer --enable-admin-flag --with-sendmail=/usr/sbin/sendmail --with-timedir=/var/lib/sudo --mandir=/usr/share/man --libexecdir=/usr/lib/sudo --with-sssd --with-sssd-lib=/usr/lib/x86_64-linux-gnu --with-selinux
Sudoers policy plugin version 1.8.9p5
Sudoers file grammar version 43

Sudoers path: /etc/sudoers
Authentication methods: 'pam'
Syslog facility if syslog is being used for logging: authpriv
Syslog priority to use when user authenticates successfully: notice
Syslog priority to use when user authenticates unsuccessfully: alert
Send mail if the user is not in sudoers
Use a separate timestamp for each user/tty combo
Lecture user the first time they run sudo
Root may run sudo
Allow some information gathering to give useful error messages
Require fully-qualified hostnames in the sudoers file
Visudo will honor the EDITOR environment variable
Set the LOGNAME and USER environment variables
Length at which to wrap log file lines (0 for no wrap): 80
Authentication timestamp timeout: 15.0 minutes
Password prompt timeout: 0.0 minutes
Number of tries to enter a password: 3
Umask to use or 0777 to use user's: 022
Path to mail program: /usr/sbin/sendmail
Flags for mail program: -t
Address to send mail to: root
Subject line for mail messages: *** SECURITY information for %h ***
Incorrect password message: Sorry, try again.
Path to authentication timestamp dir: /var/lib/sudo
Default password prompt: [sudo] password for %p: 
Default user to run commands as: root
Value to override user's $PATH with: /usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/snap/bin
Path to the editor for use by visudo: /usr/bin/editor
When to require a password for 'list' pseudocommand: any
When to require a password for 'verify' pseudocommand: all
File descriptors >= 3 will be closed before executing a command
Environment variables to check for sanity:
	TZ
	TERM
	LINGUAS
	LC_*
	LANGUAGE
	LANG
	COLORTERM
Environment variables to remove:
	RUBYOPT
	RUBYLIB
	PYTHONUSERBASE
	PYTHONINSPECT
	PYTHONPATH
	PYTHONHOME
	TMPPREFIX
	ZDOTDIR
	READNULLCMD
	NULLCMD
	FPATH
	PERL5DB
	PERL5OPT
	PERL5LIB
	PERLLIB
	PERLIO_DEBUG 
	JAVA_TOOL_OPTIONS
	SHELLOPTS
	GLOBIGNORE
	PS4
	BASH_ENV
	ENV
	TERMCAP
	TERMPATH
	TERMINFO_DIRS
	TERMINFO
	_RLD*
	LD_*
	PATH_LOCALE
	NLSPATH
	HOSTALIASES
	RES_OPTIONS
	LOCALDOMAIN
	CDPATH
	IFS
Environment variables to preserve:
	JAVA_HOME
	TRAVIS
	CI
	DEBIAN_FRONTEND
	XAUTHORIZATION
	XAUTHORITY
	PS2
	PS1
	PATH
	LS_COLORS
	KRB5CCNAME
	HOSTNAME
	HOME
	DISPLAY
	COLORS
Locale to use while parsing sudoers: C
Directory in which to store input/output logs: /var/log/sudo-io
File in which to store the input/output log: %{seq}
Add an entry to the utmp/utmpx file when allocating a pty
PAM service name to use
PAM service name to use for login shells
Create a new PAM session for the command to run in
Maximum I/O log sequence number: 0

Local IP address and netmask pairs:
	172.17.0.2/255.255.0.0

Sudoers I/O plugin version 1.8.9p5
[34m[1mgzip version[0m
gzip 1.6
Copyright (C) 2007, 2010, 2011 Free Software Foundation, Inc.
Copyright (C) 1993 Jean-loup Gailly.
This is free software.  You may redistribute copies of it under the terms of
the GNU General Public License <http://www.gnu.org/licenses/gpl.html>.
There is NO WARRANTY, to the extent permitted by law.

Written by Jean-loup Gailly.
[34m[1mzip version[0m
Copyright (c) 1990-2008 Info-ZIP - Type 'zip "-L"' for software license.
This is Zip 3.0 (July 5th 2008), by Info-ZIP.
Currently maintained by E. Gordon.  Please send bug reports to
the authors using the web page at www.info-zip.org; see README for details.

Latest sources and executables are at ftp://ftp.info-zip.org/pub/infozip,
as of above date; see http://www.info-zip.org/ for other sites.

Compiled with gcc 4.8.2 for Unix (Linux ELF) on Oct 21 2013.

Zip special compilation options:
	USE_EF_UT_TIME       (store Universal Time)
	BZIP2_SUPPORT        (bzip2 library version 1.0.6, 6-Sept-2010)
	    bzip2 code and library copyright (c) Julian R Seward
	    (See the bzip2 license for terms of use)
	SYMLINK_SUPPORT      (symbolic links supported)
	LARGE_FILE_SUPPORT   (can read and write large files on file system)
	ZIP64_SUPPORT        (use Zip64 to store large files in archives)
	UNICODE_SUPPORT      (store and read UTF-8 Unicode paths)
	STORE_UNIX_UIDs_GIDs (store UID/GID sizes/values using new extra field)
	UIDGID_NOT_16BIT     (old Unix 16-bit UID/GID extra field not used)
	[encryption, version 2.91 of 05 Jan 2007] (modified for Zip 3)

Encryption notice:
	The encryption code of this program is not copyrighted and is
	put in the public domain.  It was originally written in Europe
	and, to the best of our knowledge, can be freely distributed
	in both source and object forms from any country, including
	the USA under License Exception TSU of the U.S. Export
	Administration Regulations (section 740.13(e)) of 6 June 2002.

Zip environment options:
             ZIP:  [none]
          ZIPOPT:  [none]
[34m[1mvim version[0m
VIM - Vi IMproved 7.4 (2013 Aug 10, compiled Nov 24 2016 16:43:18)
Included patches: 1-52
Extra patches: 8.0.0056
Modified by pkg-vim-maintainers@lists.alioth.debian.org
Compiled by buildd@
Huge version without GUI.  Features included (+) or not (-):
+acl             +farsi           +mouse_netterm   +syntax
+arabic          +file_in_path    +mouse_sgr       +tag_binary
+autocmd         +find_in_path    -mouse_sysmouse  +tag_old_static
-balloon_eval    +float           +mouse_urxvt     -tag_any_white
-browse          +folding         +mouse_xterm     -tcl
++builtin_terms  -footer          +multi_byte      +terminfo
+byte_offset     +fork()          +multi_lang      +termresponse
+cindent         +gettext         -mzscheme        +textobjects
-clientserver    -hangul_input    +netbeans_intg   +title
-clipboard       +iconv           +path_extra      -toolbar
+cmdline_compl   +insert_expand   -perl            +user_commands
+cmdline_hist    +jumplist        +persistent_undo +vertsplit
+cmdline_info    +keymap          +postscript      +virtualedit
+comments        +langmap         +printer         +visual
+conceal         +libcall         +profile         +visualextra
+cryptv          +linebreak       +python          +viminfo
+cscope          +lispindent      -python3         +vreplace
+cursorbind      +listcmds        +quickfix        +wildignore
+cursorshape     +localmap        +reltime         +wildmenu
+dialog_con      -lua             +rightleft       +windows
+diff            +menu            -ruby            +writebackup
+digraphs        +mksession       +scrollbind      -X11
-dnd             +modify_fname    +signs           -xfontset
-ebcdic          +mouse           +smartindent     -xim
+emacs_tags      -mouseshape      -sniff           -xsmp
+eval            +mouse_dec       +startuptime     -xterm_clipboard
+ex_extra        +mouse_gpm       +statusline      -xterm_save
+extra_search    -mouse_jsbterm   -sun_workshop    -xpm
   system vimrc file: "$VIM/vimrc"
     user vimrc file: "$HOME/.vimrc"
 2nd user vimrc file: "~/.vim/vimrc"
      user exrc file: "$HOME/.exrc"
  fall-back for $VIM: "/usr/share/vim"
Compilation: gcc -c -I. -Iproto -DHAVE_CONFIG_H     -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -U_FORTIFY_SOURCE -D_FORTIFY_SOURCE=1      
Linking: gcc   -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--as-needed -o vim        -lm -ltinfo -lnsl  -lselinux  -lacl -lattr -lgpm -ldl    -L/usr/lib/python2.7/config-x86_64-linux-gnu -lpython2.7 -lpthread -ldl -lutil -lm -Xlinker -export-dynamic -Wl,-O1 -Wl,-Bsymbolic-functions      
[34m[1miptables version[0m
iptables v1.4.21
[34m[1mcurl version[0m
curl 7.35.0 (x86_64-pc-linux-gnu) libcurl/7.35.0 OpenSSL/1.0.1f zlib/1.2.8 libidn/1.28 librtmp/2.3
[34m[1mwget version[0m
GNU Wget 1.15 built on linux-gnu.
[34m[1mrsync version[0m
rsync  version 3.1.0  protocol version 31
[34m[1mgimme version[0m
v1.2.0
[34m[1mnvm version[0m
0.33.6
[34m[1mperlbrew version[0m
/home/travis/perl5/perlbrew/bin/perlbrew  - App::perlbrew/0.80
[34m[1mphpenv version[0m
rbenv 1.1.1-25-g6aa70b6
[34m[1mrvm version[0m
rvm 1.29.3 (latest) by Michal Papis, Piotr Kuczynski, Wayne E. Seguin [https://rvm.io]
[34m[1mdefault ruby version[0m
ruby 2.4.1p111 (2017-03-22 revision 58053) [x86_64-linux]
[34m[1mCouchDB version[0m
couchdb 1.6.1
[34m[1mElasticSearch version[0m
5.5.0
[34m[1mInstalled Firefox version[0m
firefox 56.0.2
[34m[1mMongoDB version[0m
MongoDB 3.4.10
[34m[1mPhantomJS version[0m
2.1.1
[34m[1mPre-installed PostgreSQL versions[0m
9.2.24
9.3.20
9.4.15
9.5.10
9.6.6
[34m[1mRabbitMQ Version[0m
3.6.14
[34m[1mRedis version[0m
redis-server 4.0.6
[34m[1mriak version[0m
2.2.3
[34m[1mPre-installed Go versions[0m
1.7.4
[34m[1mant version[0m
Apache Ant(TM) version 1.9.3 compiled on April 8 2014
[34m[1mmvn version[0m
Apache Maven 3.5.2 (138edd61fd100ec658bfa2d307c43b76940a5d7d; 2017-10-18T07:58:13Z)
Maven home: /usr/local/maven-3.5.2
Java version: 1.8.0_151, vendor: Oracle Corporation
Java home: /usr/lib/jvm/java-8-oracle/jre
Default locale: en_US, platform encoding: UTF-8
OS name: "linux", version: "4.4.0-101-generic", arch: "amd64", family: "unix"
[34m[1mgradle version[0m

------------------------------------------------------------
Gradle 4.0.1
------------------------------------------------------------

Build time:   2017-07-07 14:02:41 UTC
Revision:     38e5dc0f772daecca1d2681885d3d85414eb6826

Groovy:       2.4.11
Ant:          Apache Ant(TM) version 1.9.6 compiled on June 29 2015
JVM:          1.8.0_151 (Oracle Corporation 25.151-b12)
OS:           Linux 4.4.0-101-generic amd64

[34m[1mlein version[0m
Leiningen 2.8.1 on Java 1.8.0_151 Java HotSpot(TM) 64-Bit Server VM
[34m[1mPre-installed Node.js versions[0m
v4.8.6
v6.12.0
v6.12.1
v8.9
v8.9.1
[34m[1mphpenv versions[0m
  system
  5.6
* 5.6.32 (set by /home/travis/.phpenv/version)
  7.0
  7.0.25
  7.1
  7.1.11
  hhvm
  hhvm-stable
[34m[1mcomposer --version[0m
Composer version 1.5.2 2017-09-11 16:59:25
[34m[1mPre-installed Ruby versions[0m
ruby-2.2.7
ruby-2.3.4
ruby-2.4.1
travis_fold:end:system_info
[0K
[32;1mNetwork availability confirmed.[0m

[32;1mR for Travis-CI is not officially supported, but is community maintained.[0m
Please file any issues at https://github.com/travis-ci/travis-ci/issues
and mention @jeroen and @jimhester in the issue
travis_fold:start:R-install
[0K[33;1mInstalling R[0m
travis_time:start:0978270c
[0K$ sudo add-apt-repository "deb https://cloud.r-project.org/bin/linux/ubuntu $(lsb_release -cs)/"

travis_time:end:0978270c:start=1533848401449627631,finish=1533848401897742904,duration=448115273
[0Ktravis_time:start:2a192498
[0K$ sudo apt-key adv --keyserver keyserver.ubuntu.com --recv-keys E084DAB9
Executing: /tmp/tmp.W8rPuuV2bv/gpg.1.sh --keyserver
keyserver.ubuntu.com
--recv-keys
E084DAB9
gpg: requesting key E084DAB9 from hkp server keyserver.ubuntu.com
gpg: key E084DAB9: public key "Michael Rutter <marutter@gmail.com>" imported
gpg: Total number processed: 1
gpg:               imported: 1  (RSA: 1)

travis_time:end:2a192498:start=1533848401902358390,finish=1533848402421455463,duration=519097073
[0Ktravis_time:start:02a6e4d9
[0K$ sudo add-apt-repository -y "ppa:marutter/rrutter3.5"
gpg: keyring `/tmp/tmp49im3ufy/secring.gpg' created
gpg: keyring `/tmp/tmp49im3ufy/pubring.gpg' created
gpg: requesting key B04C661B from hkp server keyserver.ubuntu.com
gpg: /tmp/tmp49im3ufy/trustdb.gpg: trustdb created
gpg: key B04C661B: public key "Launchpad PPA for marutter" imported
gpg: Total number processed: 1
gpg:               imported: 1  (RSA: 1)
OK

travis_time:end:02a6e4d9:start=1533848402425001200,finish=1533848403769428659,duration=1344427459
[0Ktravis_time:start:096fdaac
[0K$ sudo add-apt-repository -y "ppa:marutter/c2d4u3.5"
gpg: keyring `/tmp/tmpt3ds_w_3/secring.gpg' created
gpg: keyring `/tmp/tmpt3ds_w_3/pubring.gpg' created
gpg: requesting key B04C661B from hkp server keyserver.ubuntu.com
gpg: /tmp/tmpt3ds_w_3/trustdb.gpg: trustdb created
gpg: key B04C661B: public key "Launchpad PPA for marutter" imported
gpg: Total number processed: 1
gpg:               imported: 1  (RSA: 1)
OK

travis_time:end:096fdaac:start=1533848403772895026,finish=1533848406180919938,duration=2408024912
[0Ktravis_time:start:035f9db4
[0K$ sudo add-apt-repository -y "ppa:ubuntugis/ppa"
gpg: keyring `/tmp/tmp6g3n93p7/secring.gpg' created
gpg: keyring `/tmp/tmp6g3n93p7/pubring.gpg' created
gpg: requesting key 314DF160 from hkp server keyserver.ubuntu.com
gpg: /tmp/tmp6g3n93p7/trustdb.gpg: trustdb created
gpg: key 314DF160: public key "Launchpad ubuntugis-stable" imported
gpg: Total number processed: 1
gpg:               imported: 1  (RSA: 1)
OK

travis_time:end:035f9db4:start=1533848406185498164,finish=1533848408033338488,duration=1847840324
[0Ktravis_time:start:094b723f
[0K$ sudo add-apt-repository -y "ppa:opencpu/jq"
gpg: keyring `/tmp/tmpydq980c0/secring.gpg' created
gpg: keyring `/tmp/tmpydq980c0/pubring.gpg' created
gpg: requesting key 7B3E569E from hkp server keyserver.ubuntu.com
gpg: /tmp/tmpydq980c0/trustdb.gpg: trustdb created
gpg: key 7B3E569E: public key "Launchpad PPA for OpenCPU" imported
gpg: Total number processed: 1
gpg:               imported: 1  (RSA: 1)
OK

travis_time:end:094b723f:start=1533848408038939155,finish=1533848409823107812,duration=1784168657
[0Ktravis_time:start:00263518
[0K$ sudo add-apt-repository -y "ppa:kirillshkrogalev/ffmpeg-next"
gpg: keyring `/tmp/tmpudstydtu/secring.gpg' created
gpg: keyring `/tmp/tmpudstydtu/pubring.gpg' created
gpg: requesting key 8EFE5982 from hkp server keyserver.ubuntu.com
gpg: /tmp/tmpudstydtu/trustdb.gpg: trustdb created
gpg: key 8EFE5982: public key "Launchpad PPA for Kyrill" imported
gpg: Total number processed: 1
gpg:               imported: 1  (RSA: 1)
OK

travis_time:end:00263518:start=1533848409828574687,finish=1533848412026269673,duration=2197694986
[0Ktravis_time:start:1a4978d8
[0K$ sudo apt-get update -qq
W: http://ppa.launchpad.net/couchdb/stable/ubuntu/dists/trusty/Release.gpg: Signature by key 15866BAFD9BCC4F3C1E0DFC7D69548E1C17EAB57 uses weak digest algorithm (SHA1)
W: http://ppa.launchpad.net/kirillshkrogalev/ffmpeg-next/ubuntu/dists/trusty/Release.gpg: Signature by key 1EC6DBC9AA41BD34B32CC5A15C50E96D8EFE5982 uses weak digest algorithm (SHA1)

travis_time:end:1a4978d8:start=1533848412033626857,finish=1533848425945474713,duration=13911847856
[0Ktravis_time:start:029ec4a0
[0K$ sudo apt-get install -y --no-install-recommends build-essential gcc g++ libblas-dev liblapack-dev libncurses5-dev libreadline-dev libjpeg-dev libpcre3-dev libpng-dev zlib1g-dev libbz2-dev liblzma-dev libicu-dev cdbs qpdf texinfo libssh2-1-dev gfortran

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 1%

Reading package lists... 1%

Reading package lists... 1%

Reading package lists... 1%

Reading package lists... 1%

Reading package lists... 1%

Reading package lists... 1%

Reading package lists... 1%

Reading package lists... 1%

Reading package lists... 1%

Reading package lists... 1%

Reading package lists... 29%

Reading package lists... 29%

Reading package lists... 58%

Reading package lists... 58%

Reading package lists... 58%

Reading package lists... 58%

Reading package lists... 58%

Reading package lists... 58%

Reading package lists... 62%

Reading package lists... 62%

Reading package lists... 62%

Reading package lists... 62%

Reading package lists... 62%

Reading package lists... 62%

Reading package lists... 62%

Reading package lists... 62%

Reading package lists... 62%

Reading package lists... 62%

Reading package lists... 71%

Reading package lists... 71%

Reading package lists... 80%

Reading package lists... 80%

Reading package lists... 80%

Reading package lists... 80%

Reading package lists... 80%

Reading package lists... 80%

Reading package lists... 80%

Reading package lists... 80%

Reading package lists... 81%

Reading package lists... 81%

Reading package lists... 83%

Reading package lists... 83%

Reading package lists... 86%

Reading package lists... 86%

Reading package lists... 86%

Reading package lists... 86%

Reading package lists... 86%

Reading package lists... 86%

Reading package lists... Done


Building dependency tree... 0%

Building dependency tree... 0%

Building dependency tree... 50%

Building dependency tree... 50%

Building dependency tree... 77%

Building dependency tree       


Reading state information... 0%

Reading state information... 0%

Reading state information... Done

Note, selecting 'libpng12-dev' instead of 'libpng-dev'
build-essential is already the newest version (11.6ubuntu6).
g++ is already the newest version (4:4.8.2-1ubuntu6).
g++ set to manually installed.
gcc is already the newest version (4:4.8.2-1ubuntu6).
libbz2-dev is already the newest version (1.0.6-5).
libjpeg-dev is already the newest version (8c-2ubuntu8).
liblzma-dev is already the newest version (5.1.1alpha+20120614-2ubuntu2).
liblzma-dev set to manually installed.
libncurses5-dev is already the newest version (5.9+20140118-1ubuntu1).
libreadline-dev is already the newest version (6.3-4ubuntu2).
libpcre3-dev is already the newest version (1:8.31-2ubuntu2.3).
libpcre3-dev set to manually installed.
The following additional packages will be installed:
  cpp-4.8 debhelper dh-apparmor dh-translations g++-4.8 gcc-4.8 gcc-4.8-base
  gfortran-4.8 icu-devtools intltool intltool-debian libasan0 libatomic1
  libblas3 libencode-locale-perl libfile-listing-perl libgcc-4.8-dev
  libgfortran-4.8-dev libgfortran3 libgomp1 libhtml-parser-perl
  libhtml-tagset-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl
  libhttp-message-perl libhttp-negotiate-perl libicu52 libintl-perl
  libio-html-perl libio-socket-ssl-perl libitm1 liblapack3
  liblwp-mediatypes-perl liblwp-protocol-https-perl libnet-http-perl
  libnet-ssleay-perl libpng12-0 libqpdf21 libquadmath0 libssh2-1
  libstdc++-4.8-dev libstdc++6 libtext-unidecode-perl libtsan0 liburi-perl
  libwww-perl libwww-robotrules-perl libxml-libxml-perl
  libxml-namespacesupport-perl libxml-parser-perl libxml-sax-base-perl
  libxml-sax-perl po-debconf python-scour zlib1g
Suggested packages:
  devscripts gcc-4.8-locales dh-make apparmor-easyprof g++-4.8-multilib
  gcc-4.8-doc libstdc++6-4.8-dbg gcc-4.8-multilib libgcc1-dbg libgomp1-dbg
  libitm1-dbg libatomic1-dbg libasan0-dbg libtsan0-dbg libquadmath0-dbg
  gfortran-multilib gfortran-doc gfortran-4.8-multilib gfortran-4.8-doc
  libgfortran3-dbg libdata-dump-perl icu-doc libintl-xs-perl
  libcrypt-ssleay-perl libstdc++-4.8-doc libauthen-ntlm-perl libmail-box-perl
  python-rsvg python-cairo texlive-base texlive-latex-base
  texlive-generic-recommended texinfo-doc-nonfree
Recommended packages:
  libhtml-format-perl libio-socket-inet6-perl | libio-socket-ip-perl
  libhtml-form-perl libhttp-daemon-perl libmailtools-perl
  libxml-sax-expat-perl libmail-sendmail-perl
The following NEW packages will be installed:
  cdbs debhelper dh-apparmor dh-translations gfortran gfortran-4.8 intltool
  intltool-debian libblas-dev libblas3 libencode-locale-perl
  libfile-listing-perl libgfortran-4.8-dev libgfortran3 libhtml-parser-perl
  libhtml-tagset-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl
  libhttp-message-perl libhttp-negotiate-perl libintl-perl libio-html-perl
  libio-socket-ssl-perl liblapack-dev liblapack3 liblwp-mediatypes-perl
  liblwp-protocol-https-perl libnet-http-perl libnet-ssleay-perl libqpdf21
  libssh2-1 libssh2-1-dev libtext-unidecode-perl liburi-perl libwww-perl
  libwww-robotrules-perl libxml-libxml-perl libxml-namespacesupport-perl
  libxml-parser-perl libxml-sax-base-perl libxml-sax-perl po-debconf
  python-scour qpdf texinfo
The following packages will be upgraded:
  cpp-4.8 g++-4.8 gcc-4.8 gcc-4.8-base icu-devtools libasan0 libatomic1
  libgcc-4.8-dev libgomp1 libicu-dev libicu52 libitm1 libpng12-0 libpng12-dev
  libquadmath0 libstdc++-4.8-dev libstdc++6 libtsan0 zlib1g zlib1g-dev
20 upgraded, 46 newly installed, 0 to remove and 208 not upgraded.
Need to get 60.7 MB of archives.
After this operation, 56.4 MB of additional disk space will be used.

0% [Working]
            
Get:1 http://archive.ubuntu.com/ubuntu trusty-updates/main amd64 zlib1g-dev amd64 1:1.2.8.dfsg-1ubuntu1.1 [166 kB]

0% [1 zlib1g-dev 14.2 kB/166 kB 9%]
                                   
1% [Working]
            
Get:2 http://archive.ubuntu.com/ubuntu trusty-updates/main amd64 zlib1g amd64 1:1.2.8.dfsg-1ubuntu1.1 [49.8 kB]

1% [2 zlib1g 0 B/49.8 kB 0%]
                            
1% [Working]
            
Get:3 http://archive.ubuntu.com/ubuntu trusty-updates/main amd64 libpng12-dev amd64 1.2.50-1ubuntu2.14.04.3 [206 kB]

1% [3 libpng12-dev 0 B/206 kB 0%]
                                 
1% [Working]
            
Get:4 http://archive.ubuntu.com/ubuntu trusty-updates/main amd64 libpng12-0 amd64 1.2.50-1ubuntu2.14.04.3 [118 kB]

1% [4 libpng12-0 0 B/118 kB 0%]
                               
2% [Working]
            
Get:5 http://archive.ubuntu.com/ubuntu trusty-updates/main amd64 libatomic1 amd64 4.8.4-2ubuntu1~14.04.4 [8,630 B]

2% [5 libatomic1 0 B/8,630 B 0%]
                                
2% [Working]
            
Get:6 http://archive.ubuntu.com/ubuntu trusty-updates/main amd64 libitm1 amd64 4.8.4-2ubuntu1~14.04.4 [28.6 kB]

2% [6 libitm1 0 B/28.6 kB 0%]
                             
3% [Working]
            
Get:7 http://archive.ubuntu.com/ubuntu trusty-updates/main amd64 libgomp1 amd64 4.8.4-2ubuntu1~14.04.4 [23.1 kB]

3% [7 libgomp1 0 B/23.1 kB 0%]
                              
3% [Working]
            
Get:8 http://archive.ubuntu.com/ubuntu trusty-updates/main amd64 libasan0 amd64 4.8.4-2ubuntu1~14.04.4 [63.1 kB]

3% [8 libasan0 0 B/63.1 kB 0%]
                              
3% [Working]
            
Get:9 http://archive.ubuntu.com/ubuntu trusty-updates/main amd64 libtsan0 amd64 4.8.4-2ubuntu1~14.04.4 [94.8 kB]

3% [9 libtsan0 0 B/94.8 kB 0%]
                              
4% [Working]
            
Get:10 http://archive.ubuntu.com/ubuntu trusty-updates/main amd64 libquadmath0 amd64 4.8.4-2ubuntu1~14.04.4 [126 kB]

4% [10 libquadmath0 0 B/126 kB 0%]
                                  
4% [Working]
            
Get:11 http://archive.ubuntu.com/ubuntu trusty-updates/main amd64 g++-4.8 amd64 4.8.4-2ubuntu1~14.04.4 [18.0 MB]

4% [11 g++-4.8 0 B/18.0 MB 0%]
17% [11 g++-4.8 9,336 kB/18.0 MB 52%]
                                     
28% [Working]
             
Get:12 http://archive.ubuntu.com/ubuntu trusty-updates/main amd64 gcc-4.8 amd64 4.8.4-2ubuntu1~14.04.4 [5,040 kB]

28% [12 gcc-4.8 0 B/5,040 kB 0%]
                                
35% [Working]
             
Get:13 http://archive.ubuntu.com/ubuntu trusty-updates/main amd64 cpp-4.8 amd64 4.8.4-2ubuntu1~14.04.4 [4,452 kB]

35% [13 cpp-4.8 0 B/4,452 kB 0%]
                                
41% [Working]
             
Get:14 http://archive.ubuntu.com/ubuntu trusty-updates/main amd64 libstdc++-4.8-dev amd64 4.8.4-2ubuntu1~14.04.4 [1,051 kB]

41% [14 libstdc++-4.8-dev 0 B/1,051 kB 0%]
                                          
43% [Working]
             
Get:15 http://archive.ubuntu.com/ubuntu trusty-updates/main amd64 libgcc-4.8-dev amd64 4.8.4-2ubuntu1~14.04.4 [1,688 kB]

43% [15 libgcc-4.8-dev 0 B/1,688 kB 0%]
                                       
46% [Working]
             
Get:16 http://archive.ubuntu.com/ubuntu trusty-updates/main amd64 gcc-4.8-base amd64 4.8.4-2ubuntu1~14.04.4 [16.7 kB]

46% [16 gcc-4.8-base 0 B/16.7 kB 0%]
                                    
46% [Working]
             
Get:17 http://archive.ubuntu.com/ubuntu trusty-updates/main amd64 libstdc++6 amd64 4.8.4-2ubuntu1~14.04.4 [260 kB]

46% [17 libstdc++6 0 B/260 kB 0%]
                                 
47% [Working]
             
Get:18 http://archive.ubuntu.com/ubuntu trusty-updates/main amd64 libgfortran3 amd64 4.8.4-2ubuntu1~14.04.4 [248 kB]

47% [18 libgfortran3 0 B/248 kB 0%]
                                   
47% [Working]
             
Get:19 http://archive.ubuntu.com/ubuntu trusty-updates/main amd64 libicu-dev amd64 52.1-3ubuntu0.8 [7,615 kB]

47% [19 libicu-dev 0 B/7,615 kB 0%]
                                   
58% [Working]
             
Get:20 http://archive.ubuntu.com/ubuntu trusty-updates/main amd64 icu-devtools amd64 52.1-3ubuntu0.8 [163 kB]

58% [20 icu-devtools 0 B/163 kB 0%]
                                   
58% [Working]
             
Get:21 http://archive.ubuntu.com/ubuntu trusty-updates/main amd64 libicu52 amd64 52.1-3ubuntu0.8 [6,751 kB]

58% [21 libicu52 0 B/6,751 kB 0%]
                                 
67% [Working]
             
Get:22 http://archive.ubuntu.com/ubuntu trusty-updates/main amd64 libqpdf21 amd64 8.0.2-3~14.04.1 [313 kB]

67% [22 libqpdf21 0 B/313 kB 0%]
                                
68% [Working]
             
Get:23 http://archive.ubuntu.com/ubuntu trusty-updates/universe amd64 libssh2-1 amd64 1.4.3-2ubuntu0.1 [66.4 kB]

68% [23 libssh2-1 0 B/66.4 kB 0%]
                                 
68% [Working]
             
Get:24 http://archive.ubuntu.com/ubuntu trusty/main amd64 intltool-debian all 0.35.0+20060710.1 [31.6 kB]

68% [24 intltool-debian 0 B/31.6 kB 0%]
                                       
69% [Working]
             
Get:25 http://archive.ubuntu.com/ubuntu trusty/main amd64 po-debconf all 1.0.16+nmu2ubuntu1 [210 kB]

69% [25 po-debconf 0 B/210 kB 0%]
                                 
69% [Working]
             
Get:26 http://archive.ubuntu.com/ubuntu trusty-updates/main amd64 dh-apparmor all 2.10.95-0ubuntu2.6~14.04.3 [11.6 kB]

69% [26 dh-apparmor 0 B/11.6 kB 0%]
                                   
70% [Working]
             
Get:27 http://archive.ubuntu.com/ubuntu trusty/main amd64 debhelper all 9.20131227ubuntu1 [604 kB]

70% [27 debhelper 0 B/604 kB 0%]
                                
71% [Working]
             
Get:28 http://archive.ubuntu.com/ubuntu trusty/main amd64 liburi-perl all 1.60-1 [89.6 kB]

71% [28 liburi-perl 0 B/89.6 kB 0%]
                                   
71% [Working]
             
Get:29 http://archive.ubuntu.com/ubuntu trusty/main amd64 libencode-locale-perl all 1.03-1 [12.4 kB]

71% [29 libencode-locale-perl 0 B/12.4 kB 0%]
                                             
71% [Working]
             
Get:30 http://archive.ubuntu.com/ubuntu trusty/main amd64 libhttp-date-perl all 6.02-1 [10.4 kB]

71% [30 libhttp-date-perl 0 B/10.4 kB 0%]
                                         
72% [Working]
             
Get:31 http://archive.ubuntu.com/ubuntu trusty/main amd64 libfile-listing-perl all 6.04-1 [9,774 B]

72% [31 libfile-listing-perl 0 B/9,774 B 0%]
                                            
72% [Working]
             
Get:32 http://archive.ubuntu.com/ubuntu trusty/main amd64 libhtml-tagset-perl all 3.20-2 [13.5 kB]

72% [32 libhtml-tagset-perl 0 B/13.5 kB 0%]
                                           
72% [Working]
             
Get:33 http://archive.ubuntu.com/ubuntu trusty/main amd64 libhtml-parser-perl amd64 3.71-1build1 [98.2 kB]

72% [33 libhtml-parser-perl 0 B/98.2 kB 0%]
                                           
73% [Working]
             
Get:34 http://archive.ubuntu.com/ubuntu trusty/main amd64 libhtml-tree-perl all 5.03-1 [215 kB]

73% [34 libhtml-tree-perl 0 B/215 kB 0%]
                                        
73% [Working]
             
Get:35 http://archive.ubuntu.com/ubuntu trusty/main amd64 libio-html-perl all 1.00-1 [15.7 kB]

73% [35 libio-html-perl 0 B/15.7 kB 0%]
                                       
74% [Working]
             
Get:36 http://archive.ubuntu.com/ubuntu trusty/main amd64 liblwp-mediatypes-perl all 6.02-1 [21.7 kB]

74% [36 liblwp-mediatypes-perl 0 B/21.7 kB 0%]
                                              
74% [Working]
             
Get:37 http://archive.ubuntu.com/ubuntu trusty/main amd64 libhttp-message-perl all 6.06-1 [78.7 kB]

74% [37 libhttp-message-perl 0 B/78.7 kB 0%]
                                            
74% [Working]
             
Get:38 http://archive.ubuntu.com/ubuntu trusty/main amd64 libhttp-cookies-perl all 6.00-2 [23.3 kB]

74% [38 libhttp-cookies-perl 0 B/23.3 kB 0%]
                                            
75% [Working]
             
Get:39 http://archive.ubuntu.com/ubuntu trusty/main amd64 libhttp-negotiate-perl all 6.00-2 [13.4 kB]

75% [39 libhttp-negotiate-perl 0 B/13.4 kB 0%]
                                              
75% [Working]
             
Get:40 http://archive.ubuntu.com/ubuntu trusty/main amd64 libnet-ssleay-perl amd64 1.58-1 [243 kB]

75% [40 libnet-ssleay-perl 0 B/243 kB 0%]
                                         
76% [Working]
             
Get:41 http://archive.ubuntu.com/ubuntu trusty/main amd64 libio-socket-ssl-perl all 1.965-1ubuntu1 [73.7 kB]

76% [41 libio-socket-ssl-perl 0 B/73.7 kB 0%]
                                             
76% [Working]
             
Get:42 http://archive.ubuntu.com/ubuntu trusty/main amd64 libnet-http-perl all 6.06-1 [24.2 kB]

76% [42 libnet-http-perl 0 B/24.2 kB 0%]
                                        
76% [Working]
             
Get:43 http://archive.ubuntu.com/ubuntu trusty-updates/main amd64 liblwp-protocol-https-perl all 6.04-2ubuntu0.1 [7,644 B]

76% [43 liblwp-protocol-https-perl 0 B/7,644 B 0%]
                                                  
77% [Working]
             
Get:44 http://archive.ubuntu.com/ubuntu trusty/main amd64 libwww-robotrules-perl all 6.01-1 [14.1 kB]

77% [44 libwww-robotrules-perl 0 B/14.1 kB 0%]
                                              
77% [Working]
             
Get:45 http://archive.ubuntu.com/ubuntu trusty/main amd64 libwww-perl all 6.05-2 [146 kB]

77% [45 libwww-perl 0 B/146 kB 0%]
                                  
78% [Working]
             
Get:46 http://archive.ubuntu.com/ubuntu trusty/main amd64 libxml-parser-perl amd64 2.41-1build3 [294 kB]

78% [46 libxml-parser-perl 0 B/294 kB 0%]
                                         
78% [Working]
             
Get:47 http://archive.ubuntu.com/ubuntu trusty/main amd64 intltool all 0.50.2-2 [52.0 kB]

78% [47 intltool 0 B/52.0 kB 0%]
                                
79% [Working]
             
Get:48 http://archive.ubuntu.com/ubuntu trusty/main amd64 dh-translations all 121 [21.6 kB]

79% [48 dh-translations 0 B/21.6 kB 0%]
                                       
79% [Working]
             
Get:49 http://archive.ubuntu.com/ubuntu trusty/main amd64 python-scour all 0.26-3build1 [40.5 kB]

79% [49 python-scour 0 B/40.5 kB 0%]
                                    
79% [Working]
             
Get:50 http://archive.ubuntu.com/ubuntu trusty/main amd64 cdbs all 0.4.122ubuntu2 [42.1 kB]

79% [50 cdbs 0 B/42.1 kB 0%]
                            
80% [Working]
             
Get:51 http://archive.ubuntu.com/ubuntu trusty-updates/main amd64 libgfortran-4.8-dev amd64 4.8.4-2ubuntu1~14.04.4 [268 kB]

80% [51 libgfortran-4.8-dev 0 B/268 kB 0%]
                                          
80% [Working]
             
Get:52 http://archive.ubuntu.com/ubuntu trusty-updates/main amd64 gfortran-4.8 amd64 4.8.4-2ubuntu1~14.04.4 [4,733 kB]

80% [52 gfortran-4.8 0 B/4,733 kB 0%]
                                     
87% [Working]
             
Get:53 http://archive.ubuntu.com/ubuntu trusty/main amd64 gfortran amd64 4:4.8.2-1ubuntu6 [1,252 B]

87% [53 gfortran 0 B/1,252 B 0%]
                                
87% [Working]
             
Get:54 http://archive.ubuntu.com/ubuntu trusty/main amd64 libblas3 amd64 1.2.20110419-7 [215 kB]

87% [54 libblas3 0 B/215 kB 0%]
                               
88% [Working]
             
Get:55 http://archive.ubuntu.com/ubuntu trusty/main amd64 libblas-dev amd64 1.2.20110419-7 [240 kB]

88% [55 libblas-dev 0 B/240 kB 0%]
                                  
88% [Working]
             
Get:56 http://archive.ubuntu.com/ubuntu trusty/main amd64 libintl-perl all 1.23-1build1 [1,204 kB]

88% [56 libintl-perl 0 B/1,204 kB 0%]
                                     
90% [Working]
             
Get:57 http://archive.ubuntu.com/ubuntu trusty/main amd64 liblapack3 amd64 3.5.0-2ubuntu1 [1,730 kB]

90% [57 liblapack3 0 B/1,730 kB 0%]
                                   
93% [Working]
             
Get:58 http://archive.ubuntu.com/ubuntu trusty/main amd64 liblapack-dev amd64 3.5.0-2ubuntu1 [1,740 kB]

93% [58 liblapack-dev 0 B/1,740 kB 0%]
                                      
95% [Working]
             
Get:59 http://archive.ubuntu.com/ubuntu trusty-updates/universe amd64 libssh2-1-dev amd64 1.4.3-2ubuntu0.1 [229 kB]

95% [59 libssh2-1-dev 0 B/229 kB 0%]
                                    
96% [Working]
             
Get:60 http://archive.ubuntu.com/ubuntu trusty/main amd64 libtext-unidecode-perl all 0.04-2 [115 kB]

96% [60 libtext-unidecode-perl 0 B/115 kB 0%]
                                             
97% [Working]
             
Get:61 http://archive.ubuntu.com/ubuntu trusty/main amd64 libxml-namespacesupport-perl all 1.11-1 [13.2 kB]

97% [61 libxml-namespacesupport-perl 0 B/13.2 kB 0%]
                                                    
97% [Working]
             
Get:62 http://archive.ubuntu.com/ubuntu trusty/main amd64 libxml-sax-base-perl all 1.07-1 [21.5 kB]

97% [62 libxml-sax-base-perl 0 B/21.5 kB 0%]
                                            
97% [Working]
             
Get:63 http://archive.ubuntu.com/ubuntu trusty/main amd64 libxml-sax-perl all 0.99+dfsg-2ubuntu1 [64.6 kB]

97% [63 libxml-sax-perl 0 B/64.6 kB 0%]
                                       
98% [Working]
             
Get:64 http://archive.ubuntu.com/ubuntu trusty-updates/main amd64 libxml-libxml-perl amd64 2.0108+dfsg-1ubuntu0.2 [336 kB]

98% [64 libxml-libxml-perl 0 B/336 kB 0%]
                                         
98% [Working]
             
Get:65 http://archive.ubuntu.com/ubuntu trusty-updates/main amd64 qpdf amd64 8.0.2-3~14.04.1 [243 kB]

98% [65 qpdf 0 B/243 kB 0%]
                           
99% [Working]
             
Get:66 http://archive.ubuntu.com/ubuntu trusty/main amd64 texinfo amd64 5.2.0.dfsg.1-2 [561 kB]

99% [66 texinfo 0 B/561 kB 0%]
                              
100% [Working]
              
Fetched 60.7 MB in 3s (19.6 MB/s)

Extracting templates from packages: 45%
Extracting templates from packages: 90%
Extracting templates from packages: 100%
(Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 72205 files and directories currently installed.)
Preparing to unpack .../zlib1g-dev_1%3a1.2.8.dfsg-1ubuntu1.1_amd64.deb ...
Unpacking zlib1g-dev:amd64 (1:1.2.8.dfsg-1ubuntu1.1) over (1:1.2.8.dfsg-1ubuntu1) ...
Preparing to unpack .../zlib1g_1%3a1.2.8.dfsg-1ubuntu1.1_amd64.deb ...
Unpacking zlib1g:amd64 (1:1.2.8.dfsg-1ubuntu1.1) over (1:1.2.8.dfsg-1ubuntu1) ...
Processing triggers for man-db (2.6.7.1-1ubuntu1) ...
Setting up zlib1g:amd64 (1:1.2.8.dfsg-1ubuntu1.1) ...
Processing triggers for libc-bin (2.19-0ubuntu6.13) ...
(Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 72205 files and directories currently installed.)
Preparing to unpack .../libpng12-dev_1.2.50-1ubuntu2.14.04.3_amd64.deb ...
Unpacking libpng12-dev (1.2.50-1ubuntu2.14.04.3) over (1.2.50-1ubuntu2.14.04.2) ...
Preparing to unpack .../libpng12-0_1.2.50-1ubuntu2.14.04.3_amd64.deb ...
Unpacking libpng12-0:amd64 (1.2.50-1ubuntu2.14.04.3) over (1.2.50-1ubuntu2.14.04.2) ...
Processing triggers for man-db (2.6.7.1-1ubuntu1) ...
Setting up libpng12-0:amd64 (1.2.50-1ubuntu2.14.04.3) ...
Processing triggers for libc-bin (2.19-0ubuntu6.13) ...
(Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 72205 files and directories currently installed.)
Preparing to unpack .../libatomic1_4.8.4-2ubuntu1~14.04.4_amd64.deb ...
Unpacking libatomic1:amd64 (4.8.4-2ubuntu1~14.04.4) over (4.8.4-2ubuntu1~14.04.3) ...
Preparing to unpack .../libitm1_4.8.4-2ubuntu1~14.04.4_amd64.deb ...
Unpacking libitm1:amd64 (4.8.4-2ubuntu1~14.04.4) over (4.8.4-2ubuntu1~14.04.3) ...
Preparing to unpack .../libgomp1_4.8.4-2ubuntu1~14.04.4_amd64.deb ...
Unpacking libgomp1:amd64 (4.8.4-2ubuntu1~14.04.4) over (4.8.4-2ubuntu1~14.04.3) ...
Preparing to unpack .../libasan0_4.8.4-2ubuntu1~14.04.4_amd64.deb ...
Unpacking libasan0:amd64 (4.8.4-2ubuntu1~14.04.4) over (4.8.4-2ubuntu1~14.04.3) ...
Preparing to unpack .../libtsan0_4.8.4-2ubuntu1~14.04.4_amd64.deb ...
Unpacking libtsan0:amd64 (4.8.4-2ubuntu1~14.04.4) over (4.8.4-2ubuntu1~14.04.3) ...
Preparing to unpack .../libquadmath0_4.8.4-2ubuntu1~14.04.4_amd64.deb ...
Unpacking libquadmath0:amd64 (4.8.4-2ubuntu1~14.04.4) over (4.8.4-2ubuntu1~14.04.3) ...
Preparing to unpack .../g++-4.8_4.8.4-2ubuntu1~14.04.4_amd64.deb ...
Unpacking g++-4.8 (4.8.4-2ubuntu1~14.04.4) over (4.8.4-2ubuntu1~14.04.3) ...
Preparing to unpack .../gcc-4.8_4.8.4-2ubuntu1~14.04.4_amd64.deb ...
Unpacking gcc-4.8 (4.8.4-2ubuntu1~14.04.4) over (4.8.4-2ubuntu1~14.04.3) ...
Preparing to unpack .../cpp-4.8_4.8.4-2ubuntu1~14.04.4_amd64.deb ...
Unpacking cpp-4.8 (4.8.4-2ubuntu1~14.04.4) over (4.8.4-2ubuntu1~14.04.3) ...
Preparing to unpack .../libstdc++-4.8-dev_4.8.4-2ubuntu1~14.04.4_amd64.deb ...
Unpacking libstdc++-4.8-dev:amd64 (4.8.4-2ubuntu1~14.04.4) over (4.8.4-2ubuntu1~14.04.3) ...
Preparing to unpack .../libgcc-4.8-dev_4.8.4-2ubuntu1~14.04.4_amd64.deb ...
Unpacking libgcc-4.8-dev:amd64 (4.8.4-2ubuntu1~14.04.4) over (4.8.4-2ubuntu1~14.04.3) ...
Preparing to unpack .../gcc-4.8-base_4.8.4-2ubuntu1~14.04.4_amd64.deb ...
Unpacking gcc-4.8-base:amd64 (4.8.4-2ubuntu1~14.04.4) over (4.8.4-2ubuntu1~14.04.3) ...
Processing triggers for ccache (3.1.9-1) ...
Updating symlinks in /usr/lib/ccache ...
Processing triggers for man-db (2.6.7.1-1ubuntu1) ...
Setting up gcc-4.8-base:amd64 (4.8.4-2ubuntu1~14.04.4) ...
(Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 72205 files and directories currently installed.)
Preparing to unpack .../libstdc++6_4.8.4-2ubuntu1~14.04.4_amd64.deb ...
Unpacking libstdc++6:amd64 (4.8.4-2ubuntu1~14.04.4) over (4.8.4-2ubuntu1~14.04.3) ...
Setting up libstdc++6:amd64 (4.8.4-2ubuntu1~14.04.4) ...
Processing triggers for libc-bin (2.19-0ubuntu6.13) ...
Selecting previously unselected package libgfortran3:amd64.
(Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 72205 files and directories currently installed.)
Preparing to unpack .../libgfortran3_4.8.4-2ubuntu1~14.04.4_amd64.deb ...
Unpacking libgfortran3:amd64 (4.8.4-2ubuntu1~14.04.4) ...
Preparing to unpack .../libicu-dev_52.1-3ubuntu0.8_amd64.deb ...
Unpacking libicu-dev:amd64 (52.1-3ubuntu0.8) over (52.1-3ubuntu0.7) ...
Preparing to unpack .../icu-devtools_52.1-3ubuntu0.8_amd64.deb ...
Unpacking icu-devtools (52.1-3ubuntu0.8) over (52.1-3ubuntu0.7) ...
Preparing to unpack .../libicu52_52.1-3ubuntu0.8_amd64.deb ...
Unpacking libicu52:amd64 (52.1-3ubuntu0.8) over (52.1-3ubuntu0.7) ...
Selecting previously unselected package libqpdf21:amd64.
Preparing to unpack .../libqpdf21_8.0.2-3~14.04.1_amd64.deb ...
Unpacking libqpdf21:amd64 (8.0.2-3~14.04.1) ...
Selecting previously unselected package libssh2-1:amd64.
Preparing to unpack .../libssh2-1_1.4.3-2ubuntu0.1_amd64.deb ...
Unpacking libssh2-1:amd64 (1.4.3-2ubuntu0.1) ...
Selecting previously unselected package intltool-debian.
Preparing to unpack .../intltool-debian_0.35.0+20060710.1_all.deb ...
Unpacking intltool-debian (0.35.0+20060710.1) ...
Selecting previously unselected package po-debconf.
Preparing to unpack .../po-debconf_1.0.16+nmu2ubuntu1_all.deb ...
Unpacking po-debconf (1.0.16+nmu2ubuntu1) ...
Selecting previously unselected package dh-apparmor.
Preparing to unpack .../dh-apparmor_2.10.95-0ubuntu2.6~14.04.3_all.deb ...
Unpacking dh-apparmor (2.10.95-0ubuntu2.6~14.04.3) ...
Selecting previously unselected package debhelper.
Preparing to unpack .../debhelper_9.20131227ubuntu1_all.deb ...
Unpacking debhelper (9.20131227ubuntu1) ...
Selecting previously unselected package liburi-perl.
Preparing to unpack .../liburi-perl_1.60-1_all.deb ...
Unpacking liburi-perl (1.60-1) ...
Selecting previously unselected package libencode-locale-perl.
Preparing to unpack .../libencode-locale-perl_1.03-1_all.deb ...
Unpacking libencode-locale-perl (1.03-1) ...
Selecting previously unselected package libhttp-date-perl.
Preparing to unpack .../libhttp-date-perl_6.02-1_all.deb ...
Unpacking libhttp-date-perl (6.02-1) ...
Selecting previously unselected package libfile-listing-perl.
Preparing to unpack .../libfile-listing-perl_6.04-1_all.deb ...
Unpacking libfile-listing-perl (6.04-1) ...
Selecting previously unselected package libhtml-tagset-perl.
Preparing to unpack .../libhtml-tagset-perl_3.20-2_all.deb ...
Unpacking libhtml-tagset-perl (3.20-2) ...
Selecting previously unselected package libhtml-parser-perl.
Preparing to unpack .../libhtml-parser-perl_3.71-1build1_amd64.deb ...
Unpacking libhtml-parser-perl (3.71-1build1) ...
Selecting previously unselected package libhtml-tree-perl.
Preparing to unpack .../libhtml-tree-perl_5.03-1_all.deb ...
Unpacking libhtml-tree-perl (5.03-1) ...
Selecting previously unselected package libio-html-perl.
Preparing to unpack .../libio-html-perl_1.00-1_all.deb ...
Unpacking libio-html-perl (1.00-1) ...
Selecting previously unselected package liblwp-mediatypes-perl.
Preparing to unpack .../liblwp-mediatypes-perl_6.02-1_all.deb ...
Unpacking liblwp-mediatypes-perl (6.02-1) ...
Selecting previously unselected package libhttp-message-perl.
Preparing to unpack .../libhttp-message-perl_6.06-1_all.deb ...
Unpacking libhttp-message-perl (6.06-1) ...
Selecting previously unselected package libhttp-cookies-perl.
Preparing to unpack .../libhttp-cookies-perl_6.00-2_all.deb ...
Unpacking libhttp-cookies-perl (6.00-2) ...
Selecting previously unselected package libhttp-negotiate-perl.
Preparing to unpack .../libhttp-negotiate-perl_6.00-2_all.deb ...
Unpacking libhttp-negotiate-perl (6.00-2) ...
Selecting previously unselected package libnet-ssleay-perl.
Preparing to unpack .../libnet-ssleay-perl_1.58-1_amd64.deb ...
Unpacking libnet-ssleay-perl (1.58-1) ...
Selecting previously unselected package libio-socket-ssl-perl.
Preparing to unpack .../libio-socket-ssl-perl_1.965-1ubuntu1_all.deb ...
Unpacking libio-socket-ssl-perl (1.965-1ubuntu1) ...
Selecting previously unselected package libnet-http-perl.
Preparing to unpack .../libnet-http-perl_6.06-1_all.deb ...
Unpacking libnet-http-perl (6.06-1) ...
Selecting previously unselected package liblwp-protocol-https-perl.
Preparing to unpack .../liblwp-protocol-https-perl_6.04-2ubuntu0.1_all.deb ...
Unpacking liblwp-protocol-https-perl (6.04-2ubuntu0.1) ...
Selecting previously unselected package libwww-robotrules-perl.
Preparing to unpack .../libwww-robotrules-perl_6.01-1_all.deb ...
Unpacking libwww-robotrules-perl (6.01-1) ...
Selecting previously unselected package libwww-perl.
Preparing to unpack .../libwww-perl_6.05-2_all.deb ...
Unpacking libwww-perl (6.05-2) ...
Selecting previously unselected package libxml-parser-perl.
Preparing to unpack .../libxml-parser-perl_2.41-1build3_amd64.deb ...
Unpacking libxml-parser-perl (2.41-1build3) ...
Selecting previously unselected package intltool.
Preparing to unpack .../intltool_0.50.2-2_all.deb ...
Unpacking intltool (0.50.2-2) ...
Selecting previously unselected package dh-translations.
Preparing to unpack .../dh-translations_121_all.deb ...
Unpacking dh-translations (121) ...
Selecting previously unselected package python-scour.
Preparing to unpack .../python-scour_0.26-3build1_all.deb ...
Unpacking python-scour (0.26-3build1) ...
Selecting previously unselected package cdbs.
Preparing to unpack .../cdbs_0.4.122ubuntu2_all.deb ...
Unpacking cdbs (0.4.122ubuntu2) ...
Selecting previously unselected package libgfortran-4.8-dev:amd64.
Preparing to unpack .../libgfortran-4.8-dev_4.8.4-2ubuntu1~14.04.4_amd64.deb ...
Unpacking libgfortran-4.8-dev:amd64 (4.8.4-2ubuntu1~14.04.4) ...
Selecting previously unselected package gfortran-4.8.
Preparing to unpack .../gfortran-4.8_4.8.4-2ubuntu1~14.04.4_amd64.deb ...
Unpacking gfortran-4.8 (4.8.4-2ubuntu1~14.04.4) ...
Selecting previously unselected package gfortran.
Preparing to unpack .../gfortran_4%3a4.8.2-1ubuntu6_amd64.deb ...
Unpacking gfortran (4:4.8.2-1ubuntu6) ...
Selecting previously unselected package libblas3.
Preparing to unpack .../libblas3_1.2.20110419-7_amd64.deb ...
Unpacking libblas3 (1.2.20110419-7) ...
Selecting previously unselected package libblas-dev.
Preparing to unpack .../libblas-dev_1.2.20110419-7_amd64.deb ...
Unpacking libblas-dev (1.2.20110419-7) ...
Selecting previously unselected package libintl-perl.
Preparing to unpack .../libintl-perl_1.23-1build1_all.deb ...
Unpacking libintl-perl (1.23-1build1) ...
Selecting previously unselected package liblapack3.
Preparing to unpack .../liblapack3_3.5.0-2ubuntu1_amd64.deb ...
Unpacking liblapack3 (3.5.0-2ubuntu1) ...
Selecting previously unselected package liblapack-dev.
Preparing to unpack .../liblapack-dev_3.5.0-2ubuntu1_amd64.deb ...
Unpacking liblapack-dev (3.5.0-2ubuntu1) ...
Selecting previously unselected package libssh2-1-dev:amd64.
Preparing to unpack .../libssh2-1-dev_1.4.3-2ubuntu0.1_amd64.deb ...
Unpacking libssh2-1-dev:amd64 (1.4.3-2ubuntu0.1) ...
Selecting previously unselected package libtext-unidecode-perl.
Preparing to unpack .../libtext-unidecode-perl_0.04-2_all.deb ...
Unpacking libtext-unidecode-perl (0.04-2) ...
Selecting previously unselected package libxml-namespacesupport-perl.
Preparing to unpack .../libxml-namespacesupport-perl_1.11-1_all.deb ...
Unpacking libxml-namespacesupport-perl (1.11-1) ...
Selecting previously unselected package libxml-sax-base-perl.
Preparing to unpack .../libxml-sax-base-perl_1.07-1_all.deb ...
Unpacking libxml-sax-base-perl (1.07-1) ...
Selecting previously unselected package libxml-sax-perl.
Preparing to unpack .../libxml-sax-perl_0.99+dfsg-2ubuntu1_all.deb ...
Unpacking libxml-sax-perl (0.99+dfsg-2ubuntu1) ...
Selecting previously unselected package libxml-libxml-perl.
Preparing to unpack .../libxml-libxml-perl_2.0108+dfsg-1ubuntu0.2_amd64.deb ...
Unpacking libxml-libxml-perl (2.0108+dfsg-1ubuntu0.2) ...
Selecting previously unselected package qpdf.
Preparing to unpack .../qpdf_8.0.2-3~14.04.1_amd64.deb ...
Unpacking qpdf (8.0.2-3~14.04.1) ...
Selecting previously unselected package texinfo.
Preparing to unpack .../texinfo_5.2.0.dfsg.1-2_amd64.deb ...
Unpacking texinfo (5.2.0.dfsg.1-2) ...
Processing triggers for man-db (2.6.7.1-1ubuntu1) ...
Processing triggers for ccache (3.1.9-1) ...
Updating symlinks in /usr/lib/ccache ...
Setting up zlib1g-dev:amd64 (1:1.2.8.dfsg-1ubuntu1.1) ...
Setting up libpng12-dev (1.2.50-1ubuntu2.14.04.3) ...
Setting up libatomic1:amd64 (4.8.4-2ubuntu1~14.04.4) ...
Setting up libitm1:amd64 (4.8.4-2ubuntu1~14.04.4) ...
Setting up libgomp1:amd64 (4.8.4-2ubuntu1~14.04.4) ...
Setting up libasan0:amd64 (4.8.4-2ubuntu1~14.04.4) ...
Setting up libtsan0:amd64 (4.8.4-2ubuntu1~14.04.4) ...
Setting up libquadmath0:amd64 (4.8.4-2ubuntu1~14.04.4) ...
Setting up cpp-4.8 (4.8.4-2ubuntu1~14.04.4) ...
Setting up libgcc-4.8-dev:amd64 (4.8.4-2ubuntu1~14.04.4) ...
Setting up gcc-4.8 (4.8.4-2ubuntu1~14.04.4) ...
Setting up libstdc++-4.8-dev:amd64 (4.8.4-2ubuntu1~14.04.4) ...
Setting up g++-4.8 (4.8.4-2ubuntu1~14.04.4) ...
Setting up libgfortran3:amd64 (4.8.4-2ubuntu1~14.04.4) ...
Setting up libicu52:amd64 (52.1-3ubuntu0.8) ...
Setting up icu-devtools (52.1-3ubuntu0.8) ...
Setting up libicu-dev:amd64 (52.1-3ubuntu0.8) ...
Setting up libqpdf21:amd64 (8.0.2-3~14.04.1) ...
Setting up libssh2-1:amd64 (1.4.3-2ubuntu0.1) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu2ubuntu1) ...
Setting up dh-apparmor (2.10.95-0ubuntu2.6~14.04.3) ...
Setting up debhelper (9.20131227ubuntu1) ...
Setting up liburi-perl (1.60-1) ...
Setting up libencode-locale-perl (1.03-1) ...
Setting up libhttp-date-perl (6.02-1) ...
Setting up libfile-listing-perl (6.04-1) ...
Setting up libhtml-tagset-perl (3.20-2) ...
Setting up libhtml-parser-perl (3.71-1build1) ...
Setting up libhtml-tree-perl (5.03-1) ...
Setting up libio-html-perl (1.00-1) ...
Setting up liblwp-mediatypes-perl (6.02-1) ...
Setting up libhttp-message-perl (6.06-1) ...
Setting up libhttp-cookies-perl (6.00-2) ...
Setting up libhttp-negotiate-perl (6.00-2) ...
Setting up libnet-ssleay-perl (1.58-1) ...
Setting up libio-socket-ssl-perl (1.965-1ubuntu1) ...
Setting up libnet-http-perl (6.06-1) ...
Setting up libwww-robotrules-perl (6.01-1) ...
Setting up python-scour (0.26-3build1) ...
Setting up libgfortran-4.8-dev:amd64 (4.8.4-2ubuntu1~14.04.4) ...
Setting up gfortran-4.8 (4.8.4-2ubuntu1~14.04.4) ...
Setting up gfortran (4:4.8.2-1ubuntu6) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
Setting up libblas3 (1.2.20110419-7) ...
update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode
Setting up libblas-dev (1.2.20110419-7) ...
update-alternatives: using /usr/lib/libblas/libblas.so to provide /usr/lib/libblas.so (libblas.so) in auto mode
Setting up libintl-perl (1.23-1build1) ...
Setting up liblapack3 (3.5.0-2ubuntu1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode
Setting up liblapack-dev (3.5.0-2ubuntu1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode
Setting up libssh2-1-dev:amd64 (1.4.3-2ubuntu0.1) ...
Setting up libtext-unidecode-perl (0.04-2) ...
Setting up libxml-namespacesupport-perl (1.11-1) ...
Setting up libxml-sax-base-perl (1.07-1) ...
Setting up libxml-sax-perl (0.99+dfsg-2ubuntu1) ...
update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10...
update-perl-sax-parsers: Updating overall Perl SAX parser modules info file...

Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version
Setting up libxml-libxml-perl (2.0108+dfsg-1ubuntu0.2) ...
update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50...
update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50...
update-perl-sax-parsers: Updating overall Perl SAX parser modules info file...
Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version
Setting up qpdf (8.0.2-3~14.04.1) ...
Setting up texinfo (5.2.0.dfsg.1-2) ...
Setting up liblwp-protocol-https-perl (6.04-2ubuntu0.1) ...
Setting up libwww-perl (6.05-2) ...
Setting up libxml-parser-perl (2.41-1build3) ...
Setting up intltool (0.50.2-2) ...
Setting up dh-translations (121) ...
Setting up cdbs (0.4.122ubuntu2) ...
Processing triggers for libc-bin (2.19-0ubuntu6.13) ...

travis_time:end:029ec4a0:start=1533848425952065520,finish=1533848463996676769,duration=38044611249
[0Ktravis_time:start:132ae121
[0K$ curl -fLo /tmp/R-3.5.0-$(lsb_release -cs).xz https://s3.amazonaws.com/rstudio-travis/R-3.5.0-$(lsb_release -cs).xz

travis_time:end:132ae121:start=1533848464001306262,finish=1533848466515877909,duration=2514571647
[0Ktravis_time:start:162d605d
[0K$ tar xJf /tmp/R-3.5.0-$(lsb_release -cs).xz -C ~

travis_time:end:162d605d:start=1533848466520588805,finish=1533848471607713529,duration=5087124724
[0K$ rm /tmp/R-3.5.0-$(lsb_release -cs).xz
travis_time:start:002bd00a
[0K$ sudo mkdir -p /usr/local/lib/R/site-library $R_LIBS_USER

travis_time:end:002bd00a:start=1533848471676783449,finish=1533848471689166114,duration=12382665
[0Ktravis_time:start:0e3e95a8
[0K$ sudo chmod 2777 /usr/local/lib/R /usr/local/lib/R/site-library $R_LIBS_USER

travis_time:end:0e3e95a8:start=1533848471693991437,finish=1533848471703908306,duration=9916869
[0Ktravis_time:start:0c53bbd8
[0K$ echo 'options(repos = c(CRAN = "https://cloud.r-project.org"))' > ~/.Rprofile.site

travis_time:end:0c53bbd8:start=1533848471709948834,finish=1533848471713613715,duration=3664881
[0Ktravis_time:start:072ee260
[0K$ curl -fLo /tmp/texlive.tar.gz https://github.com/jimhester/ubuntu-bin/releases/download/latest/texlive.tar.gz

travis_time:end:072ee260:start=1533848471718600502,finish=1533848473716525934,duration=1997925432
[0Ktravis_time:start:08d92598
[0K$ tar xzf /tmp/texlive.tar.gz -C ~

travis_time:end:08d92598:start=1533848473721116404,finish=1533848476341903972,duration=2620787568
[0K$ export PATH=/$HOME/texlive/bin/x86_64-linux:$PATH
travis_time:start:2557809c
[0K$ tlmgr update --self
tlmgr: package repository http://ftp.math.purdue.edu/mirrors/ctan.org/systems/texlive/tlnet (verified)
tlmgr: saving backups to /home/travis/texlive/tlpkg/backups
[1/2, ??:??/??:??] update: texlive.infra [208k] (44424 -> 48275) ... done
[2/2, 00:01/00:01] update: texlive.infra.x86_64-linux [146k] (43804 -> 47820) ... done
running mktexlsr ...
done running mktexlsr.
tlmgr: package log updated: /home/travis/texlive/texmf-var/web2c/tlmgr.log

travis_time:end:2557809c:start=1533848476346216897,finish=1533848480960442694,duration=4614225797
[0Ktravis_time:start:0c5a8d9a
[0K$ curl -fLo /tmp/pandoc-2.2-1-amd64.deb https://github.com/jgm/pandoc/releases/download/2.2/pandoc-2.2-1-amd64.deb

travis_time:end:0c5a8d9a:start=1533848480966707425,finish=1533848482785382677,duration=1818675252
[0Ktravis_time:start:041f2d06
[0K$ sudo dpkg -i /tmp/pandoc-2.2-1-amd64.deb
Selecting previously unselected package pandoc.
(Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 74375 files and directories currently installed.)
Preparing to unpack /tmp/pandoc-2.2-1-amd64.deb ...
Unpacking pandoc (2.2-1) ...
Setting up pandoc (2.2-1) ...
Processing triggers for man-db (2.6.7.1-1ubuntu1) ...

travis_time:end:041f2d06:start=1533848482789282562,finish=1533848486816463743,duration=4027181181
[0Ktravis_time:start:0b427996
[0K$ sudo apt-get install -f

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 0%

Reading package lists... 1%

Reading package lists... 1%

Reading package lists... 1%

Reading package lists... 1%

Reading package lists... 1%

Reading package lists... 1%

Reading package lists... 1%

Reading package lists... 1%

Reading package lists... 1%

Reading package lists... 1%

Reading package lists... 1%

Reading package lists... 29%

Reading package lists... 29%

Reading package lists... 57%

Reading package lists... 57%

Reading package lists... 58%

Reading package lists... 58%

Reading package lists... 58%

Reading package lists... 58%

Reading package lists... 61%

Reading package lists... 61%

Reading package lists... 61%

Reading package lists... 61%

Reading package lists... 61%

Reading package lists... 61%

Reading package lists... 62%

Reading package lists... 62%

Reading package lists... 62%

Reading package lists... 62%

Reading package lists... 71%

Reading package lists... 71%

Reading package lists... 80%

Reading package lists... 80%

Reading package lists... 80%

Reading package lists... 80%

Reading package lists... 80%

Reading package lists... 80%

Reading package lists... 80%

Reading package lists... 80%

Reading package lists... 80%

Reading package lists... 80%

Reading package lists... 83%

Reading package lists... 83%

Reading package lists... 85%

Reading package lists... 85%

Reading package lists... 85%

Reading package lists... 85%

Reading package lists... 85%

Reading package lists... 85%

Reading package lists... Done


Building dependency tree... 0%

Building dependency tree... 0%

Building dependency tree... 50%

Building dependency tree... 50%

Building dependency tree... 83%

Building dependency tree       


Reading state information... 0%

Reading state information... 0%

Reading state information... Done

0 upgraded, 0 newly installed, 0 to remove and 208 not upgraded.

travis_time:end:0b427996:start=1533848486820955346,finish=1533848492881965704,duration=6061010358
[0K$ rm /tmp/pandoc-2.2-1-amd64.deb
travis_fold:end:R-install
[0K
travis_fold:start:git.checkout
[0Ktravis_time:start:065e3660
[0K$ git clone --depth=50 --branch=master https://github.com/fvafrCU/packager.git fvafrCU/packager
Cloning into 'fvafrCU/packager'...
remote: Counting objects: 440, done.[K
remote: Compressing objects:   0% (1/194)   [K
remote: Compressing objects:   1% (2/194)   [K
remote: Compressing objects:   2% (4/194)   [K
remote: Compressing objects:   3% (6/194)   [K
remote: Compressing objects:   4% (8/194)   [K
remote: Compressing objects:   5% (10/194)   [K
remote: Compressing objects:   6% (12/194)   [K
remote: Compressing objects:   7% (14/194)   [K
remote: Compressing objects:   8% (16/194)   [K
remote: Compressing objects:   9% (18/194)   [K
remote: Compressing objects:  10% (20/194)   [K
remote: Compressing objects:  11% (22/194)   [K
remote: Compressing objects:  12% (24/194)   [K
remote: Compressing objects:  13% (26/194)   [K
remote: Compressing objects:  14% (28/194)   [K
remote: Compressing objects:  15% (30/194)   [K
remote: Compressing objects:  16% (32/194)   [K
remote: Compressing objects:  17% (33/194)   [K
remote: Compressing objects:  18% (35/194)   [K
remote: Compressing objects:  19% (37/194)   [K
remote: Compressing objects:  20% (39/194)   [K
remote: Compressing objects:  21% (41/194)   [K
remote: Compressing objects:  22% (43/194)   [K
remote: Compressing objects:  23% (45/194)   [K
remote: Compressing objects:  24% (47/194)   [K
remote: Compressing objects:  25% (49/194)   [K
remote: Compressing objects:  26% (51/194)   [K
remote: Compressing objects:  27% (53/194)   [K
remote: Compressing objects:  28% (55/194)   [K
remote: Compressing objects:  29% (57/194)   [K
remote: Compressing objects:  30% (59/194)   [K
remote: Compressing objects:  31% (61/194)   [K
remote: Compressing objects:  32% (63/194)   [K
remote: Compressing objects:  33% (65/194)   [K
remote: Compressing objects:  34% (66/194)   [K
remote: Compressing objects:  35% (68/194)   [K
remote: Compressing objects:  36% (70/194)   [K
remote: Compressing objects:  37% (72/194)   [K
remote: Compressing objects:  38% (74/194)   [K
remote: Compressing objects:  39% (76/194)   [K
remote: Compressing objects:  40% (78/194)   [K
remote: Compressing objects:  41% (80/194)   [K
remote: Compressing objects:  42% (82/194)   [K
remote: Compressing objects:  43% (84/194)   [K
remote: Compressing objects:  44% (86/194)   [K
remote: Compressing objects:  45% (88/194)   [K
remote: Compressing objects:  46% (90/194)   [K
remote: Compressing objects:  47% (92/194)   [K
remote: Compressing objects:  48% (94/194)   [K
remote: Compressing objects:  49% (96/194)   [K
remote: Compressing objects:  50% (97/194)   [K
remote: Compressing objects:  51% (99/194)   [K
remote: Compressing objects:  52% (101/194)   [K
remote: Compressing objects:  53% (103/194)   [K
remote: Compressing objects:  54% (105/194)   [K
remote: Compressing objects:  55% (107/194)   [K
remote: Compressing objects:  56% (109/194)   [K
remote: Compressing objects:  57% (111/194)   [K
remote: Compressing objects:  58% (113/194)   [K
remote: Compressing objects:  59% (115/194)   [K
remote: Compressing objects:  60% (117/194)   [K
remote: Compressing objects:  61% (119/194)   [K
remote: Compressing objects:  62% (121/194)   [K
remote: Compressing objects:  63% (123/194)   [K
remote: Compressing objects:  64% (125/194)   [K
remote: Compressing objects:  65% (127/194)   [K
remote: Compressing objects:  66% (129/194)   [K
remote: Compressing objects:  67% (130/194)   [K
remote: Compressing objects:  68% (132/194)   [K
remote: Compressing objects:  69% (134/194)   [K
remote: Compressing objects:  70% (136/194)   [K
remote: Compressing objects:  71% (138/194)   [K
remote: Compressing objects:  72% (140/194)   [K
remote: Compressing objects:  73% (142/194)   [K
remote: Compressing objects:  74% (144/194)   [K
remote: Compressing objects:  75% (146/194)   [K
remote: Compressing objects:  76% (148/194)   [K
remote: Compressing objects:  77% (150/194)   [K
remote: Compressing objects:  78% (152/194)   [K
remote: Compressing objects:  79% (154/194)   [K
remote: Compressing objects:  80% (156/194)   [K
remote: Compressing objects:  81% (158/194)   [K
remote: Compressing objects:  82% (160/194)   [K
remote: Compressing objects:  83% (162/194)   [K
remote: Compressing objects:  84% (163/194)   [K
remote: Compressing objects:  85% (165/194)   [K
remote: Compressing objects:  86% (167/194)   [K
remote: Compressing objects:  87% (169/194)   [K
remote: Compressing objects:  88% (171/194)   [K
remote: Compressing objects:  89% (173/194)   [K
remote: Compressing objects:  90% (175/194)   [K
remote: Compressing objects:  91% (177/194)   [K
remote: Compressing objects:  92% (179/194)   [K
remote: Compressing objects:  93% (181/194)   [K
remote: Compressing objects:  94% (183/194)   [K
remote: Compressing objects:  95% (185/194)   [K
remote: Compressing objects:  96% (187/194)   [K
remote: Compressing objects:  97% (189/194)   [K
remote: Compressing objects:  98% (191/194)   [K
remote: Compressing objects:  99% (193/194)   [K
remote: Compressing objects: 100% (194/194)   [K
remote: Compressing objects: 100% (194/194), done.[K
Receiving objects:   0% (1/440)   
Receiving objects:   1% (5/440)   
Receiving objects:   2% (9/440)   
Receiving objects:   3% (14/440)   
Receiving objects:   4% (18/440)   
Receiving objects:   5% (22/440)   
Receiving objects:   6% (27/440)   
Receiving objects:   7% (31/440)   
Receiving objects:   8% (36/440)   
Receiving objects:   9% (40/440)   
Receiving objects:  10% (44/440)   
Receiving objects:  11% (49/440)   
Receiving objects:  12% (53/440)   
Receiving objects:  13% (58/440)   
Receiving objects:  14% (62/440)   
Receiving objects:  15% (66/440)   
Receiving objects:  16% (71/440)   
Receiving objects:  17% (75/440)   
Receiving objects:  18% (80/440)   
Receiving objects:  19% (84/440)   
Receiving objects:  20% (88/440)   
Receiving objects:  21% (93/440)   
Receiving objects:  22% (97/440)   
Receiving objects:  23% (102/440)   
Receiving objects:  24% (106/440)   
Receiving objects:  25% (110/440)   
Receiving objects:  26% (115/440)   
Receiving objects:  27% (119/440)   
Receiving objects:  28% (124/440)   
Receiving objects:  29% (128/440)   
Receiving objects:  30% (132/440)   
Receiving objects:  31% (137/440)   
Receiving objects:  32% (141/440)   
Receiving objects:  33% (146/440)   
Receiving objects:  34% (150/440)   
Receiving objects:  35% (154/440)   
Receiving objects:  36% (159/440)   
Receiving objects:  37% (163/440)   
Receiving objects:  38% (168/440)   
Receiving objects:  39% (172/440)   
Receiving objects:  40% (176/440)   
Receiving objects:  41% (181/440)   
Receiving objects:  42% (185/440)   
Receiving objects:  43% (190/440)   
Receiving objects:  44% (194/440)   
Receiving objects:  45% (198/440)   
Receiving objects:  46% (203/440)   
Receiving objects:  47% (207/440)   
Receiving objects:  48% (212/440)   
Receiving objects:  49% (216/440)   
Receiving objects:  50% (220/440)   
Receiving objects:  51% (225/440)   
Receiving objects:  52% (229/440)   
Receiving objects:  53% (234/440)   
Receiving objects:  54% (238/440)   
Receiving objects:  55% (242/440)   
Receiving objects:  56% (247/440)   
Receiving objects:  57% (251/440)   
Receiving objects:  58% (256/440)   
remote: Total 440 (delta 267), reused 380 (delta 240), pack-reused 0[K
Receiving objects:  59% (260/440)   
Receiving objects:  60% (264/440)   
Receiving objects:  61% (269/440)   
Receiving objects:  62% (273/440)   
Receiving objects:  63% (278/440)   
Receiving objects:  64% (282/440)   
Receiving objects:  65% (286/440)   
Receiving objects:  66% (291/440)   
Receiving objects:  67% (295/440)   
Receiving objects:  68% (300/440)   
Receiving objects:  69% (304/440)   
Receiving objects:  70% (308/440)   
Receiving objects:  71% (313/440)   
Receiving objects:  72% (317/440)   
Receiving objects:  73% (322/440)   
Receiving objects:  74% (326/440)   
Receiving objects:  75% (330/440)   
Receiving objects:  76% (335/440)   
Receiving objects:  77% (339/440)   
Receiving objects:  78% (344/440)   
Receiving objects:  79% (348/440)   
Receiving objects:  80% (352/440)   
Receiving objects:  81% (357/440)   
Receiving objects:  82% (361/440)   
Receiving objects:  83% (366/440)   
Receiving objects:  84% (370/440)   
Receiving objects:  85% (374/440)   
Receiving objects:  86% (379/440)   
Receiving objects:  87% (383/440)   
Receiving objects:  88% (388/440)   
Receiving objects:  89% (392/440)   
Receiving objects:  90% (396/440)   
Receiving objects:  91% (401/440)   
Receiving objects:  92% (405/440)   
Receiving objects:  93% (410/440)   
Receiving objects:  94% (414/440)   
Receiving objects:  95% (418/440)   
Receiving objects:  96% (423/440)   
Receiving objects:  97% (427/440)   
Receiving objects:  98% (432/440)   
Receiving objects:  99% (436/440)   
Receiving objects: 100% (440/440)   
Receiving objects: 100% (440/440), 132.70 KiB | 16.59 MiB/s, done.
Resolving deltas:   0% (0/267)   
Resolving deltas:  17% (46/267)   
Resolving deltas:  19% (52/267)   
Resolving deltas:  25% (67/267)   
Resolving deltas:  26% (72/267)   
Resolving deltas:  27% (74/267)   
Resolving deltas:  28% (77/267)   
Resolving deltas:  30% (81/267)   
Resolving deltas:  31% (84/267)   
Resolving deltas:  32% (88/267)   
Resolving deltas:  38% (103/267)   
Resolving deltas:  39% (105/267)   
Resolving deltas:  40% (107/267)   
Resolving deltas:  44% (119/267)   
Resolving deltas:  45% (122/267)   
Resolving deltas:  46% (123/267)   
Resolving deltas:  49% (132/267)   
Resolving deltas:  50% (136/267)   
Resolving deltas:  51% (137/267)   
Resolving deltas:  52% (141/267)   
Resolving deltas:  53% (142/267)   
Resolving deltas:  54% (145/267)   
Resolving deltas:  55% (148/267)   
Resolving deltas:  56% (150/267)   
Resolving deltas:  58% (155/267)   
Resolving deltas:  59% (160/267)   
Resolving deltas:  60% (161/267)   
Resolving deltas:  61% (164/267)   
Resolving deltas:  62% (166/267)   
Resolving deltas:  64% (173/267)   
Resolving deltas:  65% (174/267)   
Resolving deltas:  67% (181/267)   
Resolving deltas:  71% (190/267)   
Resolving deltas:  74% (200/267)   
Resolving deltas:  75% (202/267)   
Resolving deltas:  79% (211/267)   
Resolving deltas:  80% (214/267)   
Resolving deltas:  83% (224/267)   
Resolving deltas:  91% (245/267)   
Resolving deltas:  92% (248/267)   
Resolving deltas:  94% (251/267)   
Resolving deltas:  97% (259/267)   
Resolving deltas:  98% (262/267)   
Resolving deltas:  99% (265/267)   
Resolving deltas: 100% (267/267)   
Resolving deltas: 100% (267/267), done.

travis_time:end:065e3660:start=1533848502408659244,finish=1533848503189548499,duration=780889255
[0K$ cd fvafrCU/packager
$ git checkout -qf 7e9fe9936a561bfd16f84da9bbcef7e7af2fccc2
travis_fold:end:git.checkout
[0Ktravis_fold:start:cache.1
[0KSetting up build cache
$ export CASHER_DIR=$HOME/.casher
travis_time:start:00db6c4a
[0K$ Installing caching utilities

travis_time:end:00db6c4a:start=1533848508756669849,finish=1533848508860589806,duration=103919957
[0Ktravis_time:start:0b7a87b4
[0K
travis_time:end:0b7a87b4:start=1533848508867893058,finish=1533848508874019277,duration=6126219
[0Ktravis_time:start:315042d0
[0K[32;1mattempting to download cache archive[0m
[32;1mfetching master/cache-linux-trusty-e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855--R-3.5.0.tgz[0m
[32;1mfound cache[0m

travis_time:end:315042d0:start=1533848508880970816,finish=1533848517609692736,duration=8728721920
[0Ktravis_fold:end:cache.1
[0Ktravis_fold:start:package
[0K[33;1mSetting up package cache[0m
travis_time:start:30736b57
[0K
travis_time:end:30736b57:start=1533848517615404714,finish=1533848517624034371,duration=8629657
[0Ktravis_time:start:044f1c2a
[0K[32;1madding /home/travis/R/Library to cache[0m
[32;1mcreating directory /home/travis/R/Library[0m

travis_time:end:044f1c2a:start=1533848517630320663,finish=1533848521611472554,duration=3981151891
[0Ktravis_fold:end:package
[0Ktravis_fold:start:R-session-info
[0K[33;1mR session information[0m
$ Rscript -e 'sessionInfo()'
R version 3.5.0 (2017-01-27)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: Ubuntu 14.04.5 LTS

Matrix products: default
BLAS: /home/travis/R-bin/lib/R/lib/libRblas.so
LAPACK: /home/travis/R-bin/lib/R/lib/libRlapack.so

locale:
 [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C              
 [3] LC_TIME=en_US.UTF-8        LC_COLLATE=en_US.UTF-8    
 [5] LC_MONETARY=en_US.UTF-8    LC_MESSAGES=en_US.UTF-8   
 [7] LC_PAPER=en_US.UTF-8       LC_NAME=C                 
 [9] LC_ADDRESS=C               LC_TELEPHONE=C            
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C       

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

loaded via a namespace (and not attached):
[1] compiler_3.5.0
travis_fold:end:R-session-info
[0Ktravis_fold:start:R-dependencies
[0K[33;1mInstalling package dependencies[0m
Installing R packages: testthat, RUnit
travis_time:start:1e041e84
[0K$ Rscript -e 'install.packages(c("testthat", "RUnit"));if (!all(c("testthat", "RUnit") %in% installed.packages())) { q(status = 1, save = "no")}'
Installing packages into ‘/home/travis/R/Library’
(as ‘lib’ is unspecified)
trying URL 'https://cloud.r-project.org/src/contrib/testthat_2.0.0.tar.gz'
Content type 'application/x-gzip' length 217190 bytes (212 KB)
==================================================
downloaded 212 KB

trying URL 'https://cloud.r-project.org/src/contrib/RUnit_0.4.32.tar.gz'
Content type 'application/x-gzip' length 337142 bytes (329 KB)
==================================================
downloaded 329 KB

* installing *source* package ‘testthat’ ...
** package ‘testthat’ successfully unpacked and MD5 sums checked
** libs
gcc -std=gnu99 -I"/home/travis/R-bin/lib/R/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT  -I/home/travis/R-bin/include   -fpic  -g -O2  -c init.c -o init.o
gcc -std=gnu99 -I"/home/travis/R-bin/lib/R/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT  -I/home/travis/R-bin/include   -fpic  -g -O2  -c reassign.c -o reassign.o
g++  -I"/home/travis/R-bin/lib/R/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT  -I/home/travis/R-bin/include   -fpic  -g -O2  -c test-catch.cpp -o test-catch.o
g++  -I"/home/travis/R-bin/lib/R/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT  -I/home/travis/R-bin/include   -fpic  -g -O2  -c test-example.cpp -o test-example.o
g++  -I"/home/travis/R-bin/lib/R/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT  -I/home/travis/R-bin/include   -fpic  -g -O2  -c test-runner.cpp -o test-runner.o
g++ -shared -L/home/travis/R-bin/lib/R/lib -L/home/travis/R-bin/lib -o testthat.so init.o reassign.o test-catch.o test-example.o test-runner.o -L/home/travis/R-bin/lib/R/lib -lR
installing to /home/travis/R/Library/testthat/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (testthat)
* installing *source* package ‘RUnit’ ...
** package ‘RUnit’ successfully unpacked and MD5 sums checked
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (RUnit)

The downloaded source packages are in
	‘/tmp/Rtmp9k3oYH/downloaded_packages’

travis_time:end:1e041e84:start=1533848521833234829,finish=1533848544441907203,duration=22608672374
[0KInstalling R packages: devtools
travis_time:start:238e2d60
[0K$ Rscript -e 'install.packages(c("devtools"));if (!all(c("devtools") %in% installed.packages())) { q(status = 1, save = "no")}'
Installing package into ‘/home/travis/R/Library’
(as ‘lib’ is unspecified)
trying URL 'https://cloud.r-project.org/src/contrib/devtools_1.13.6.tar.gz'
Content type 'application/x-gzip' length 486446 bytes (475 KB)
==================================================
downloaded 475 KB

* installing *source* package ‘devtools’ ...
** package ‘devtools’ successfully unpacked and MD5 sums checked
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (devtools)

The downloaded source packages are in
	‘/tmp/RtmpUhmtRP/downloaded_packages’

travis_time:end:238e2d60:start=1533848544446217302,finish=1533848551942817213,duration=7496599911
[0KInstalling R packages from GitHub: jimhester/covr
travis_time:start:01e81677
[0K$ Rscript -e 'devtools::install_github(c("jimhester/covr"), build_vignettes = FALSE)'
Using bundled GitHub PAT. Please add your own PAT to the env var `GITHUB_PAT`
Skipping install of 'covr' from a github remote, the SHA1 (9b9892cb) has not changed since last install.
  Use `force = TRUE` to force installation

travis_time:end:01e81677:start=1533848551947727536,finish=1533848552570216137,duration=622488601
[0Ktravis_time:start:33102084
[0K$ Rscript -e 'deps <- devtools::dev_package_deps(dependencies = NA);devtools::install_deps(dependencies = TRUE);if (!all(deps$package %in% installed.packages())) { message("missing: ", paste(setdiff(deps$package, installed.packages()), collapse=", ")); q(status = 1, save = "no")}'

travis_time:end:33102084:start=1533848552576299936,finish=1533848557003798706,duration=4427498770
[0Ktravis_fold:end:R-dependencies
[0Ktravis_fold:start:R-installed-versions
[0K[33;1mInstalled package versions[0m
travis_time:start:11347945
[0K$ Rscript -e 'devtools::session_info(installed.packages()[, "Package"])'
Session info ------------------------------------------------------------------
 setting  value                       
 version  R version 3.5.0 (2017-01-27)
 system   x86_64, linux-gnu           
 ui       X11                         
 language (EN)                        
 collate  en_US.UTF-8                 
 tz       UTC                         
 date     2018-08-09                  

Packages ----------------------------------------------------------------------
 package    * version date       source                         
 assertthat   0.2.0   2017-04-11 CRAN (R 3.5.0)                 
 backports    1.1.2   2017-12-13 cran (@1.1.2)                  
 base       * 3.5.0   2018-04-23 local                          
 base64enc    0.1-3   2015-07-28 cran (@0.1-3)                  
 boot         1.3-20  2017-08-06 CRAN (R 3.5.0)                 
 brew         1.0-6   2011-04-13 cran (@1.0-6)                  
 callr        2.0.4   2018-05-15 cran (@2.0.4)                  
 checkmate    1.8.5   2017-10-24 cran (@1.8.5)                  
 class        7.3-14  2015-08-30 CRAN (R 3.5.0)                 
 cli          1.0.0   2017-11-05 CRAN (R 3.5.0)                 
 clipr        0.4.1   2018-06-23 cran (@0.4.1)                  
 clisymbols   1.2.0   2017-05-21 cran (@1.2.0)                  
 cluster      2.0.7-1 2018-04-13 CRAN (R 3.5.0)                 
 codetools    0.2-15  2016-10-05 CRAN (R 3.5.0)                 
 commonmark   1.5     2018-04-28 cran (@1.5)                    
 compiler     3.5.0   2018-04-23 local                          
 covr         3.1.0   2018-07-13 Github (jimhester/covr@9b9892c)
 crayon       1.3.4   2017-09-16 CRAN (R 3.5.0)                 
 curl         3.2     2018-03-28 CRAN (R 3.5.0)                 
 cyclocomp    1.1.0   2016-09-10 cran (@1.1.0)                  
 datasets   * 3.5.0   2018-04-23 local                          
 desc         1.2.0   2018-05-01 cran (@1.2.0)                  
 devtools     1.13.6  2018-06-27 CRAN (R 3.5.0)                 
 digest       0.6.15  2018-01-28 CRAN (R 3.5.0)                 
 enc          0.2.0   2018-03-03 cran (@0.2.0)                  
 evaluate     0.10.1  2017-06-24 cran (@0.10.1)                 
 fakemake     1.3.0   2018-07-13 cran (@1.3.0)                  
 foreign      0.8-70  2017-11-28 CRAN (R 3.5.0)                 
 gh           1.0.1   2017-07-16 cran (@1.0.1)                  
 git2r        0.23.0  2018-07-17 cran (@0.23.0)                 
 glue         1.2.0   2017-10-29 cran (@1.2.0)                  
 graphics   * 3.5.0   2018-04-23 local                          
 grDevices  * 3.5.0   2018-04-23 local                          
 grid         3.5.0   2018-04-23 local                          
 highr        0.7     2018-06-09 cran (@0.7)                    
 htmltools    0.3.6   2017-04-28 cran (@0.3.6)                  
 httr         1.3.1   2017-08-20 CRAN (R 3.5.0)                 
 igraph       1.2.1   2018-03-10 cran (@1.2.1)                  
 ini          0.3.1   2018-05-20 cran (@0.3.1)                  
 jsonlite     1.5     2017-06-01 CRAN (R 3.5.0)                 
 KernSmooth   2.23-15 2015-06-29 CRAN (R 3.5.0)                 
 knitr        1.20    2018-02-20 cran (@1.20)                   
 lattice      0.20-35 2017-03-25 CRAN (R 3.5.0)                 
 lazyeval     0.2.1   2017-10-29 cran (@0.2.1)                  
 lintr        1.0.2   2017-11-08 cran (@1.0.2)                  
 magrittr     1.5     2014-11-22 CRAN (R 3.5.0)                 
 MakefileR    1.0     2016-01-08 cran (@1.0)                    
 markdown     0.8     2017-04-20 cran (@0.8)                    
 MASS         7.3-49  2018-02-23 CRAN (R 3.5.0)                 
 Matrix       1.2-14  2018-04-13 CRAN (R 3.5.0)                 
 memoise      1.1.0   2017-04-21 CRAN (R 3.5.0)                 
 methods    * 3.5.0   2018-04-23 local                          
 mgcv         1.8-23  2018-01-21 CRAN (R 3.5.0)                 
 mime         0.5     2016-07-07 CRAN (R 3.5.0)                 
 nlme         3.1-137 2018-04-07 CRAN (R 3.5.0)                 
 nnet         7.3-12  2016-02-02 CRAN (R 3.5.0)                 
 openssl      1.0.1   2018-03-03 CRAN (R 3.5.0)                 
 parallel     3.5.0   2018-04-23 local                          
 pillar       1.2.3   2018-05-25 cran (@1.2.3)                  
 pkgbuild     1.0.0   2018-06-27 cran (@1.0.0)                  
 pkgconfig    2.0.1   2017-03-21 cran (@2.0.1)                  
 pkgload      1.0.0   2018-07-07 cran (@1.0.0)                  
 praise       1.0.0   2015-08-11 CRAN (R 3.5.0)                 
 processx     3.1.0   2018-05-15 cran (@3.1.0)                  
 purrr        0.2.5   2018-05-29 cran (@0.2.5)                  
 R6           2.2.2   2017-06-17 CRAN (R 3.5.0)                 
 Rcpp         0.12.18 2018-07-23 cran (@0.12.18)                
 rematch2     2.0.1   2017-06-20 cran (@2.0.1)                  
 remotes      1.1.1   2017-12-20 cran (@1.1.1)                  
 rex          1.1.2   2017-10-19 cran (@1.1.2)                  
 rlang        0.2.1   2018-05-30 CRAN (R 3.5.0)                 
 rmarkdown    1.10    2018-06-11 cran (@1.10)                   
 roxygen2     6.1.0   2018-07-27 cran (@6.1.0)                  
 rpart        4.1-13  2018-02-23 CRAN (R 3.5.0)                 
 rprojroot    1.3-2   2018-01-03 cran (@1.3-2)                  
 rstudioapi   0.7     2017-09-07 CRAN (R 3.5.0)                 
 RUnit        0.4.32  2018-05-18 CRAN (R 3.5.0)                 
 spatial      7.3-11  2015-08-30 CRAN (R 3.5.0)                 
 splines      3.5.0   2018-04-23 local                          
 stats      * 3.5.0   2018-04-23 local                          
 stats4       3.5.0   2018-04-23 local                          
 stringdist   0.9.5.1 2018-06-08 cran (@0.9.5.1)                
 stringi      1.2.4   2018-07-20 cran (@1.2.4)                  
 stringr      1.3.1   2018-05-10 cran (@1.3.1)                  
 styler       1.0.2   2018-06-26 cran (@1.0.2)                  
 survival     2.41-3  2017-04-04 CRAN (R 3.5.0)                 
 tcltk        3.5.0   2018-04-23 local                          
 testthat     2.0.0   2017-12-13 CRAN (R 3.5.0)                 
 tibble       1.4.2   2018-01-22 cran (@1.4.2)                  
 tinytex      0.6     2018-07-07 cran (@0.6)                    
 tools        3.5.0   2018-04-23 local                          
 usethis      1.3.0   2018-02-24 cran (@1.3.0)                  
 utf8         1.1.4   2018-05-24 cran (@1.1.4)                  
 utils      * 3.5.0   2018-04-23 local                          
 whisker      0.3-2   2013-04-28 CRAN (R 3.5.0)                 
 whoami       1.1.2   2017-10-20 cran (@1.1.2)                  
 withr        2.1.2   2018-03-15 CRAN (R 3.5.0)                 
 xfun         0.3     2018-07-06 cran (@0.3)                    
 xml2         1.2.0   2018-01-24 cran (@1.2.0)                  
 yaml         2.1.19  2018-05-01 cran (@2.1.19)                 

travis_time:end:11347945:start=1533848557010175238,finish=1533848557598239257,duration=588064019
[0Ktravis_fold:end:R-installed-versions
[0Ktravis_fold:start:R-build
[0K[33;1mBuilding package[0m
Building with: R CMD build 
travis_time:start:0de66b00
[0K$ R CMD build  .
* checking for file ‘./DESCRIPTION’ ... OK
* preparing ‘packager’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... OK
Warning: ‘inst/doc’ files
    ‘An_Introduction_to_packager.Rmd’,  ‘An_Introduction_to_packager.html’, ‘An_Introduction_to_packager.R’
  ignored as vignettes have been rebuilt.
  Run R CMD build with --no-build-vignettes to prevent rebuilding.
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
* building ‘packager_0.15.3.9000.tar.gz’


travis_time:end:0de66b00:start=1533848557606898209,finish=1533848560022762991,duration=2415864782
[0Ktravis_fold:end:R-build
[0Ktravis_fold:start:R-check
[0K[33;1mChecking package[0m
Checking with: R CMD check packager_0.15.3.9000.tar.gz --as-cran --no-manual --no-manual --no-manual --no-manual --no-manual --no-manual --no-manual --no-manual
travis_time:start:04ebfb14
[0K$ R CMD check "${PKG_TARBALL}" --as-cran --no-manual --no-manual --no-manual --no-manual --no-manual --no-manual --no-manual --no-manual; CHECK_RET=$?
* using log directory ‘/home/travis/build/fvafrCU/packager/packager.Rcheck’
* using R version 3.5.0 (2017-01-27)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using options ‘--no-manual --as-cran’
* checking for file ‘packager/DESCRIPTION’ ... OK
* this is package ‘packager’ version ‘0.15.3.9000’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking serialization versions ... OK
* checking whether package ‘packager’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘runit.R’
  Running ‘testthat.R’
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking re-building of vignette outputs ... OK
* DONE

Status: OK


travis_time:end:04ebfb14:start=1533848560028359961,finish=1533848579118247537,duration=19089887576
[0Ktravis_fold:end:R-check
[0Ktravis_time:start:144e8847
[0K

travis_time:end:144e8847:start=1533848579129211933,finish=1533848579553308374,duration=424096441
[0Ktravis_time:start:09faf6c8
[0K
travis_time:end:09faf6c8:start=1533848579558498395,finish=1533848579563421913,duration=4923518
[0K
[32;1mThe command "grep -q -R "WARNING" "${RCHECK_DIR}/00check.log"" exited with 0.[0m
travis_fold:start:cache.2
[0Kstore build cache
travis_time:start:0399b0e6
[0K
travis_time:end:0399b0e6:start=1533848579569200877,finish=1533848579573596468,duration=4395591
[0Ktravis_time:start:054f0c9f
[0K[32;1mchange detected (content changed, file is created, or file is deleted):
/home/travis/R/Library/devtools/DESCRIPTION
/home/travis/R/Library/devtools/help/devtools.rdb
/home/travis/R/Library/devtools/help/devtools.rdx
/home/travis/R/Library/devtools/help/paths.rds
/home/travis/R/Library/devtools/Meta/package.rds
/home/travis/R/Library/RUnit/DESCRIPTION
/home/travis/R/Library/RUnit/help/paths.rds
/home/travis/R/Library/RUnit/help/RUnit.rdb
/home/travis/R/Library/RUnit/help/RUnit.rdx
/home/travis/R/Library/RUnit/Meta/package.rds
/home/travis/R/Library/testthat/DESCRIPTION
/home/travis/R/Library/testthat/help/paths.rds
/home/travis/R/Library/testthat/help/testthat.rdb
/home/travis/R/Library/testthat/help/testthat.rdx
/home/travis/R/Library/testthat/libs/testthat.so
/home/travis/R/Library/testthat/Meta/package.rds

[0m
[32;1mchanges detected, packing new archive[0m
.
[32;1muploading archive[0m

travis_time:end:054f0c9f:start=1533848579578811828,finish=1533848588313361462,duration=8734549634
[0Ktravis_fold:end:cache.2
[0Ktravis_fold:start:after_success
[0Ktravis_time:start:06ae80c0
[0K$ Rscript -e 'covr::codecov(path = ".", function_exclusions = "\\.onLoad")'
$queued
[1] TRUE

$uploaded
[1] TRUE

$meta
$meta$status
[1] 200


$message
[1] "Coverage reports upload successfully"

$id
[1] "8b849818-a535-4848-a971-52824e04b610"

$url
[1] "https://codecov.io/github/fvafrCU/packager/commit/7e9fe9936a561bfd16f84da9bbcef7e7af2fccc2"


travis_time:end:06ae80c0:start=1533848588321241153,finish=1533848595874410351,duration=7553169198
[0Ktravis_fold:end:after_success
[0K
Done. Your build exited with 0.
