HAO                     Hymenoptera Anatomy Ontology (HAO)
Scarab                  A modified Hymenoptera Anatomy Ontology (HAO)
                        to accommodate anatomy of dung beetles
Sharkey_2011            Hymenoptera character statements
Sharkey_2011_annot      Hymenoptera characters annotated with ontology
                        terms
Tarasov_2017_annot      Dung beetle characters annotated with ontology
                        terms
annot_all_chars         Annotate all character statements with ontology
                        terms
annot_char_grep         Annotate a character statement with ontology
                        terms
chars_per_term          Get number of chracters per each ontology term
edges2list              Convert edge matrix to list
exclude_terms           Ontology terms to exclude for sunburst plot
export_annotations      Export annotation data
export_cytoscape        Export to Cytoscape format
get_ancestors_chars     Get ancestal ontology terms for a set of
                        characters
get_descendants_chars   Get characters that descendants of selected
                        ontology term
get_onto_id             Get IDs for ontology names
get_onto_name           Get names for ontology IDs
list2edges              Convert list to edge matrix
make_shiny_in           Make an ontology object for visualization
onto_process            Shortcut to process characters and ontology
paths_sunburst          Return ontology paths for characters
runOntoFast             Run ontoFAST interactively
syn_extract             Link synonyms with ontology terms
table2list              Converts a table to list
