R: Analysis of Adaptive Immune Receptor Repertoire Germ Line Statistics

# Analysis of Adaptive Immune Receptor Repertoire Germ Line Statistics

## Documentation for package ‘ogrdbstats’ version 0.5.5

- DESCRIPTION file
- User guides, package vignettes and other documentation
- Package NEWS

## Help Pages

example_rep | Example repertoire data
generate_ogrdb_report | Generate OGRDB reports from specified files.
genotype_statistics_cmd | Collect parameters from the command line and use them to create a report and CSV file
make_barplot_grobs | Create a barplot for each allele, showing number of reads distributed by mutation count
make_haplo_grobs | Create haplotyping plots
make_novel_base_grobs | Create plots showing base usage at selected locations in sequences based on novel alleles
read_input_files | Read input files into memory
write_genotype_file | Write the genotype file required by OGRDB
write_plot_file | Create the OGRDB style plot file